Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K01
         (807 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0451 + 23021139-23021269,23021366-23021498,23021594-230217...    29   4.4  
01_07_0120 + 41185884-41186127,41187228-41187310,41188596-411886...    29   5.8  

>02_04_0451 +
           23021139-23021269,23021366-23021498,23021594-23021789,
           23023376-23023737,23024049-23024363
          Length = 378

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +1

Query: 364 LHQLXTAMHHHP--PNQERAVNLSILPVSGPGEISRVESN*AAGSTPGGALPSIPLSFSF 537
           LH L T     P  P +  +   +ILP   PG  S + S    G TP G +   P  F F
Sbjct: 313 LHYLSTLSPPEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFF 372


>01_07_0120 +
           41185884-41186127,41187228-41187310,41188596-41188647,
           41188729-41188854,41188967-41189049,41189308-41189490,
           41189901-41190237,41190607-41190750,41190854-41190939,
           41191069-41191113
          Length = 460

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +1

Query: 484 AGSTPGGALPSIPLSFSFATILPPXVQNLWFPGSCPPXHCXNVGGSL 624
           AGS PGG + + P   SF++I  P V N   P S  P    N GG +
Sbjct: 325 AGSYPGGLMNNRPFGNSFSSIKVPIV-NANSPASSSP--SSNPGGQI 368


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,658,121
Number of Sequences: 37544
Number of extensions: 426085
Number of successful extensions: 940
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)