Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K01
(807 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_48355| Best HMM Match : Herpes_US9 (HMM E-Value=4.7) 33 0.21
SB_17609| Best HMM Match : Herpes_US9 (HMM E-Value=4.7) 33 0.21
SB_28753| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_34797| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_27909| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_4723| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_57065| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_23080| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34) 31 0.83
SB_29700| Best HMM Match : DUF551 (HMM E-Value=8.8) 30 2.5
SB_22783| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_42282| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_46117| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_54484| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_41723| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_21596| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_30664| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 52.0 bits (119), Expect = 6e-07
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = -2
Query: 749 WXVARRXSXKAFAXXVFINQERKLXVRRRLDTALVXTVN 633
W RR + KAFA VFINQERKL RRR DT LV T+N
Sbjct: 5 WIYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -2
Query: 737 RRXSXKAFAXXVFINQERKLXVRRRLDTALVXTVN 633
RR + KAFA VFINQERKL RRR DT LV T+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -2
Query: 737 RRXSXKAFAXXVFINQERKLXVRRRLDTALVXTVN 633
RR + KAFA VFINQERKL RRR DT LV T+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -2
Query: 737 RRXSXKAFAXXVFINQERKLXVRRRLDTALVXTVN 633
RR + KAFA VFINQERKL RRR DT LV T+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -2
Query: 737 RRXSXKAFAXXVFINQERKLXVRRRLDTALVXTVN 633
RR + KAFA VFINQERKL RRR DT LV T+N
Sbjct: 11 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 45
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -2
Query: 734 RXSXKAFAXXVFINQERKLXVRRRLDTALVXTVN 633
R + KAFA VFINQERKL RRR DT LV T+N
Sbjct: 29 RTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 62
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -2
Query: 722 KAFAXXVFINQERKLXVRRRLDTALVXTVN 633
++ A VFINQERKL RRR DT LV T+N
Sbjct: 14 ESIAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -2
Query: 704 VFINQERKLXVRRRLDTALVXTVN 633
VFINQERKL RRR DT LV T+N
Sbjct: 20 VFINQERKLEDRRRSDTVLVLTIN 43
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = -2
Query: 734 RXSXKAFAXXVFINQERKLXVRRRLDT 654
R + KAFA VFINQERKL RRR DT
Sbjct: 2 RTTAKAFAKNVFINQERKLEDRRRSDT 28
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2
Query: 701 FINQERKLXVRRRLDTALVXTVN 633
FINQERKL RRR DT LV T+N
Sbjct: 21 FINQERKLEDRRRSDTVLVLTIN 43
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2
Query: 701 FINQERKLXVRRRLDTALVXTVN 633
FINQERKL RRR DT LV T+N
Sbjct: 21 FINQERKLEDRRRSDTVLVLTIN 43
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2
Query: 701 FINQERKLXVRRRLDTALVXTVN 633
FINQERKL RRR DT LV T+N
Sbjct: 21 FINQERKLEDRRRSDTVLVLTIN 43
>SB_48355| Best HMM Match : Herpes_US9 (HMM E-Value=4.7)
Length = 98
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -1
Query: 180 CPGPHARYX*RNQHVXPWPRGPGNPLKXLRAGDWGLQL 67
C GPHARY +G GN +K RAGD LQL
Sbjct: 2 CSGPHARYTDGVNESFLRRKGVGNLVKHRRAGDRSLQL 39
>SB_17609| Best HMM Match : Herpes_US9 (HMM E-Value=4.7)
Length = 98
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -1
Query: 180 CPGPHARYX*RNQHVXPWPRGPGNPLKXLRAGDWGLQL 67
C GPHARY +G GN +K RAGD LQL
Sbjct: 2 CSGPHARYTDGVNESFLRRKGVGNLVKHRRAGDRSLQL 39
>SB_28753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = -1
Query: 180 CPGPHARYX*RNQHVXPWPRGPGNPLKXLRAGDWGLQL 67
C GPHARY G GN +K RAGD LQL
Sbjct: 2 CSGPHARYTDGVNESFLSTEGVGNLVKHRRAGDRSLQL 39
>SB_34797| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 157 VARVRPRTSKGITD 198
VARVRPRTSKGITD
Sbjct: 38 VARVRPRTSKGITD 51
>SB_27909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 157 VARVRPRTSKGITD 198
VARVRPRTSKGITD
Sbjct: 136 VARVRPRTSKGITD 149
>SB_4723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 157 VARVRPRTSKGITD 198
VARVRPRTSKGITD
Sbjct: 68 VARVRPRTSKGITD 81
>SB_57065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 157 VARVRPRTSKGITD 198
VARVRPRTSKGITD
Sbjct: 68 VARVRPRTSKGITD 81
>SB_23080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 157 VARVRPRTSKGITD 198
VARVRPRTSKGITD
Sbjct: 68 VARVRPRTSKGITD 81
>SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34)
Length = 1197
Score = 31.5 bits (68), Expect = 0.83
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1
Query: 436 PVSGPGEISRVESN*AAGSTPGGALPSIPLSFSFATILPPXVQNLWFPGSCP 591
P S PG S A STPG A+ SIP + S +T P + PG+ P
Sbjct: 1015 PSSTPGAASSTTPGAAPSSTPGAAMSSIPGATSSST---PGAASSSTPGAAP 1063
>SB_29700| Best HMM Match : DUF551 (HMM E-Value=8.8)
Length = 86
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 157 VARVRPRTSKGITD 198
VA VRPRTSKGITD
Sbjct: 68 VAHVRPRTSKGITD 81
>SB_22783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 191 MPLDVLGRTRATXEGISMXXP 129
MPLDVLGRTR +G++ P
Sbjct: 1 MPLDVLGRTRRYTDGVNESFP 21
>SB_42282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 342 PELTRQIAPPTXNGHAPPPTESRKSC*SVNPSGVRAW*DF 461
PE T ++A PT + APPP + S S P+G+R+ D+
Sbjct: 117 PESTAKVAVPTTSP-APPPPSTVTSTTSKPPTGLRSKYDY 155
>SB_46117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1
Query: 138 VXPWPRGPGNPLKXLRAGDWGLQL 67
V P P G GN +K RAGD LQL
Sbjct: 18 VFPSPEGVGNLVKHRRAGDRSLQL 41
>SB_54484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2
Query: 191 MPLDVLGRTRAT 156
MPLDVLGRTRAT
Sbjct: 1 MPLDVLGRTRAT 12
>SB_41723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2
Query: 191 MPLDVLGRTRAT 156
MPLDVLGRTRAT
Sbjct: 1 MPLDVLGRTRAT 12
>SB_21596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2
Query: 191 MPLDVLGRTRAT 156
MPLDVLGRTRAT
Sbjct: 1 MPLDVLGRTRAT 12
>SB_30664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2
Query: 191 MPLDVLGRTRAT 156
MPLDVLGRTRAT
Sbjct: 1 MPLDVLGRTRAT 12
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,096,946
Number of Sequences: 59808
Number of extensions: 415506
Number of successful extensions: 802
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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