Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_K01
         (807 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   3.6  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   6.3  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   6.3  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 62  GDNCKPQSPARRXFSGLPGPLG 127
           G  C P+  A +   GLPGP+G
Sbjct: 91  GGCCLPKCFAEKGNRGLPGPMG 112


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 477 LSRRLHSWWCPSVNSFKFQLCNHTPPGSPK 566
           L      ++C S +S  F++  H+P  +PK
Sbjct: 279 LDANASDYFCSSTSSVGFKIIFHSPSETPK 308


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 477 LSRRLHSWWCPSVNSFKFQLCNHTPPGSPK 566
           L      ++C S +S  F++  H+P  +PK
Sbjct: 279 LDANASDYFCSSTSSVGFKIIFHSPSETPK 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,613
Number of Sequences: 2352
Number of extensions: 13869
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)