Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_J24
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 188 4e-48
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 188 4e-48
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 92 4e-19
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 92 4e-19
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 30 2.4
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 29 3.2
U70844-3|AAB09093.2| 209|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical... 28 9.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 188 bits (458), Expect = 4e-48
Identities = 106/196 (54%), Positives = 127/196 (64%), Gaps = 5/196 (2%)
Frame = -2
Query: 780 PXXLGDXSXGVQYLXEIKXSFVXXXQGPXRKELW----LKRIXVVLDSTSMM*HPILMPS 613
P L D + GVQYL EIK S V Q R+ + ++ + + ++ I
Sbjct: 653 PNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGG 712
Query: 612 IEVVAKSFQQX-EDACTHVC*LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEE 436
+++ + + T LL PV Y+ V+ PE AVGGIYGVLNRRRGHVFEE
Sbjct: 713 GQIIPTARRVFYASVLTAEPRLLEPV----YL-VEIQCPEAAVGGIYGVLNRRRGHVFEE 767
Query: 435 SQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH*QVLPGDPCEPQSKPYN 256
SQV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH QVLPGDP E +KP
Sbjct: 768 SQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQ 827
Query: 255 VVQETRKRKGLKEDLP 208
+V +TRKRKGLKE +P
Sbjct: 828 IVLDTRKRKGLKEGVP 843
Score = 111 bits (267), Expect = 6e-25
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -1
Query: 817 RKIXXLXPEGTXPQXXGGLXXRXSVPX*N*GXFCGXXPGAXKEGVMAEENLXGVRFNIYD 638
RKI P+GT P + A +EGV+++EN+ GVRFN++D
Sbjct: 641 RKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHD 700
Query: 637 VTPHTDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCP*SSCG 485
VT H DAIHRGGGQIIPT RR YA +LTA+PR +EPVYL EIQCP ++ G
Sbjct: 701 VTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVG 751
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 188 bits (458), Expect = 4e-48
Identities = 106/196 (54%), Positives = 127/196 (64%), Gaps = 5/196 (2%)
Frame = -2
Query: 780 PXXLGDXSXGVQYLXEIKXSFVXXXQGPXRKELW----LKRIXVVLDSTSMM*HPILMPS 613
P L D + GVQYL EIK S V Q R+ + ++ + + ++ I
Sbjct: 653 PNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGG 712
Query: 612 IEVVAKSFQQX-EDACTHVC*LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEE 436
+++ + + T LL PV Y+ V+ PE AVGGIYGVLNRRRGHVFEE
Sbjct: 713 GQIIPTARRVFYASVLTAEPRLLEPV----YL-VEIQCPEAAVGGIYGVLNRRRGHVFEE 767
Query: 435 SQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH*QVLPGDPCEPQSKPYN 256
SQV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH QVLPGDP E +KP
Sbjct: 768 SQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQ 827
Query: 255 VVQETRKRKGLKEDLP 208
+V +TRKRKGLKE +P
Sbjct: 828 IVLDTRKRKGLKEGVP 843
Score = 111 bits (267), Expect = 6e-25
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = -1
Query: 817 RKIXXLXPEGTXPQXXGGLXXRXSVPX*N*GXFCGXXPGAXKEGVMAEENLXGVRFNIYD 638
RKI P+GT P + A +EGV+++EN+ GVRFN++D
Sbjct: 641 RKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHD 700
Query: 637 VTPHTDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCP*SSCG 485
VT H DAIHRGGGQIIPT RR YA +LTA+PR +EPVYL EIQCP ++ G
Sbjct: 701 VTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVG 751
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 92.3 bits (219), Expect = 4e-19
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 12/126 (9%)
Frame = -2
Query: 552 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 373
+ +P L Y V+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SF
Sbjct: 826 MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 885
Query: 372 GFTADLRSNTGGQAFPQCVFDH*QVLPGDPCEP---------QSKPY---NVVQETRKRK 229
GF DLR +T GQAF F H Q++PGDP + Q P+ + +TR+RK
Sbjct: 886 GFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRK 945
Query: 228 GLKEDL 211
GL ED+
Sbjct: 946 GLSEDV 951
Score = 71.7 bits (168), Expect = 6e-13
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = -1
Query: 700 AXKEGVMAEENLXGVRFNIYDVTPHTDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVY 521
A +EG + EE + V+F + D T+ ++RGGGQ+IPT RRC Y+ L A PR MEP Y
Sbjct: 777 ATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYY 836
Query: 520 LCEIQCP 500
E+ P
Sbjct: 837 TVEVVAP 843
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 92.3 bits (219), Expect = 4e-19
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 12/126 (9%)
Frame = -2
Query: 552 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 373
+ +P L Y V+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SF
Sbjct: 701 MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 760
Query: 372 GFTADLRSNTGGQAFPQCVFDH*QVLPGDPCEP---------QSKPY---NVVQETRKRK 229
GF DLR +T GQAF F H Q++PGDP + Q P+ + +TR+RK
Sbjct: 761 GFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRK 820
Query: 228 GLKEDL 211
GL ED+
Sbjct: 821 GLSEDV 826
Score = 71.7 bits (168), Expect = 6e-13
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = -1
Query: 700 AXKEGVMAEENLXGVRFNIYDVTPHTDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVY 521
A +EG + EE + V+F + D T+ ++RGGGQ+IPT RRC Y+ L A PR MEP Y
Sbjct: 652 ATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYY 711
Query: 520 LCEIQCP 500
E+ P
Sbjct: 712 TVEVVAP 718
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/70 (40%), Positives = 38/70 (54%)
Frame = -2
Query: 492 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 313
A+G ++ VL++R+ V E T +F V + +PV ESF F LR T G A Q F
Sbjct: 769 ALGKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQF 828
Query: 312 DH*QVLPGDP 283
H QV+ DP
Sbjct: 829 SHWQVIDEDP 838
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/55 (41%), Positives = 27/55 (49%)
Frame = -2
Query: 447 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDH*QVLPGDP 283
V E T +F V + +PV ESF F LR T G A Q F H QV+ DP
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 649
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -2
Query: 516 VKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 337
V+ +VP G + L +R + G I +A P+++ FG+T++LRS T G
Sbjct: 649 VEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSELRSLTEG 706
Query: 336 Q 334
+
Sbjct: 707 K 707
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 59 LLSHLRVCFNMMRNMCC*K*TCVKRFPYRYVFLICFNYVV 178
+L+ LR+C+ C + TC K FP ++V L+ ++VV
Sbjct: 290 ILTPLRICYTSCLFQHC-QITCQKNFPTKFVDLLSLSHVV 328
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 292 REDLSMVEYALREGLSAGVGTQIGSKTERLID 387
+ED++ +EY + E ++ +GTQ+ KT +D
Sbjct: 232 QEDVTRIEYLIHEYQNSDIGTQMLKKTRTAVD 263
>U70844-3|AAB09093.2| 209|Caenorhabditis elegans Hypothetical
protein ZK154.1 protein.
Length = 209
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 523 YLCEIQCP*SSCGWYLRCTEQTSWSRFRRVPGGRYTYV 410
Y C +QC W +C E TS+S FR GR T+V
Sbjct: 42 YTCAVQCE-----WRKQCNEHTSFSTFR----GRRTFV 70
>AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical
protein F55A12.1 protein.
Length = 892
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 331 LPAVRIRPLTGPPWRPVRTSEQALQRCTGNE 239
+P V P T PP PV Q L + TGN+
Sbjct: 15 MPPVTAPPGTMPPMPPVPADAQKLHQITGND 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,378,095
Number of Sequences: 27780
Number of extensions: 368059
Number of successful extensions: 888
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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