Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J23
         (814 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0155 - 20712601-20713553,20713618-20714000,20714240-207142...    32   0.62 
04_03_0642 + 18289461-18290897,18291586-18291666                       29   4.4  
03_02_0137 + 5832608-5833590,5833680-5833731,5833827-5833904,583...    29   4.4  
01_06_0948 - 33242219-33242530,33242632-33242782,33242874-332431...    29   5.8  

>11_06_0155 -
           20712601-20713553,20713618-20714000,20714240-20714271,
           20714315-20714571,20714699-20714724,20714894-20715081,
           20715302-20715595,20715714-20715752,20715827-20715944,
           20716076-20716157,20716610-20716668,20717156-20717221,
           20717358-20717447,20718142-20718236
          Length = 893

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 205 HEYGQSLKLDAHVDSYGDRLLWGNNGNVDGNPGYFGWV 92
           H+   +LK DAH  S+    +W     VD  P  +GW+
Sbjct: 280 HKISTTLKKDAHARSFECGQIWALYSEVDKFPKLYGWI 317


>04_03_0642 + 18289461-18290897,18291586-18291666
          Length = 505

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -1

Query: 307 DRKAWGSNNSNEKGHLWKLTPVVLETGNVLLIENHEYGQSLKLDAHVDSYGDRL 146
           DR  W S+   E GHL ++  VV +  + LL E + Y   +K+ A  +   D L
Sbjct: 6   DRLEWHSHKETEAGHLRQIKDVVYDAED-LLDEYNYYALKVKVKASKNLGQDHL 58


>03_02_0137 +
           5832608-5833590,5833680-5833731,5833827-5833904,
           5835228-5835347,5835618-5835716,5835821-5835975,
           5836117-5836257,5836395-5836503
          Length = 578

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = +1

Query: 145 AGGR---RSCPRARPASDSARTRGSL*VRRCRSPALQASASTDGLSRSSCWNPTLSCLRY 315
           AGGR    + P ++PAS +  +  S        PA  A+A+  G + +   NPTL+ L +
Sbjct: 19  AGGRAAGNTTPSSKPASRARLSHASSENAHPNIPAAAAAAAAAGEAGTPSKNPTLARLSH 78

Query: 316 SST 324
           +S+
Sbjct: 79  ASS 81


>01_06_0948 -
           33242219-33242530,33242632-33242782,33242874-33243111,
           33243196-33243298,33243323-33243406,33243640-33243815,
           33243943-33244074,33248406-33248967,33249084-33249842
          Length = 838

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = +1

Query: 151 GRRSCPRARPASDSARTRGSL*VRRCRSPALQASASTDGLSRSSCWNPTL---SCLRYSS 321
           GR  C R+ P      T G + V   + P  + S    GLS   C    L   SC  Y+S
Sbjct: 336 GRAGCVRSTPLDCQNGTDGFVAVEHAKVPDTERSVVDLGLSLEQCRKACLMNCSCTAYAS 395

Query: 322 TFMS 333
             +S
Sbjct: 396 ANVS 399


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,223,443
Number of Sequences: 37544
Number of extensions: 454364
Number of successful extensions: 1669
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1668
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)