Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J23
         (814 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    29   0.23 
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    27   0.69 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    27   0.91 
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    25   2.1  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   3.7  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    24   4.8  
AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          23   8.5  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 533  LSCLVINLISEGKKSLTISWCPADHNLSAYANTL--GSRAR 649
            +  ++ +L  E KK L ++W   D N  +  +TL  G++AR
Sbjct: 1013 IQAIITDLDEEKKKKLKVAWSEVDENFGSIFSTLLPGTQAR 1053


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 27.1 bits (57), Expect = 0.69
 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
 Frame = +3

Query: 93  TQPKYPGLPSTFPLFPQSRRSP*LSTCASSFRLCPYSWFSMSKT-LPVSSTTGVSFHRWP 269
           T    P  P T P  P    +P       S    PY+  SMSK+  P   T G + H+  
Sbjct: 15  TATSLPVAPGTGPTTPGVYSAPNSMLVTGSMPPSPYAPLSMSKSQTPPQDTVGTAQHQLH 74

Query: 270 FS--FELLEPHAFLS 308
                 +  PH+ LS
Sbjct: 75  HQGHSPVASPHSALS 89


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 26.6 bits (56), Expect = 0.91
 Identities = 19/83 (22%), Positives = 38/83 (45%)
 Frame = -3

Query: 257 EADACSAGDRQRLTHREPRVRAESEAGRARGQLRRPPALGKQWKRRW*SWVLRLGHQRVA 78
           + D   AG +Q L+HR  R   ++ AGR   +         Q+ R+     LR  + +  
Sbjct: 271 QPDENPAGAQQHLSHRPQRSTRKNPAGRQHDRCDSRRWKTTQFNRQSFRVALRANNFQER 330

Query: 77  VELHINSDTLQATINICADSKKK 9
              HI    ++A ++ C+++ ++
Sbjct: 331 AVSHIG--MIEALVDACSETMQR 351


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 275 VRVVGTPRFPVSXTLLRSCPASGT*YIQYSIFYTAAC 385
           V+ + T   P +  L R CPA G  +++ + FY  +C
Sbjct: 277 VQQLDTAAAPTNHHLYR-CPACGNLFVELTNFYNHSC 312


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 127 FHCFPRAGGRRSCPRARPASDSART 201
           FHC P A GR   P A  A  + R+
Sbjct: 665 FHCLPSATGRDISPSASAAGLTTRS 689


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
 Frame = +1

Query: 271  SRSSCWNPTLSCLRYSSTFMSSFRYIVYSV---FNILYSSLLFSHTGINFQLTL*LILSL 441
            S ++CWNP     R SST++      V      FN+  S   F   G++   ++ +++  
Sbjct: 2756 SANNCWNPLKWDWRSSSTWIGLLTGAVTGASIPFNMASSVAFFVGMGLSLSTSIAIMVGT 2815

Query: 442  AVS 450
             ++
Sbjct: 2816 GIT 2818


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
 Frame = -3

Query: 437 DKISHRVSW---KFIPVWENNKLLYKILNTEYTMYLKLDMNVEEXRRQESVGFQQLERER 267
           D++  R  W   K    WE   L+Y IL +      K    ++E R +  V   Q  +  
Sbjct: 168 DELVKRAQWLLEKLGYPWEMMPLMYVILKSADGDVQKAHQRIDEDRLEIHVNHLQARKML 227

Query: 266 PS----VEADACSAGDRQRLTHREPRVRAESE 183
           PS    +  + C     + L+  + R R +++
Sbjct: 228 PSRPQLLLLELCKRSSFRSLSMHKRRTRKQNK 259


>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 26  HKYLLSPVRYLNLCEVLLPR 85
           HKYL+   R  ++CE  + R
Sbjct: 354 HKYLVKAARQFDICEQFIGR 373


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,018
Number of Sequences: 2352
Number of extensions: 16459
Number of successful extensions: 47
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)