Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J23
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80841-1|AAB37939.1|  477|Caenorhabditis elegans Hypothetical pr...    37   0.020
Z70750-10|CAA94746.1|  439|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z77656-1|CAB01141.2|  350|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>U80841-1|AAB37939.1|  477|Caenorhabditis elegans Hypothetical
           protein C13A10.1 protein.
          Length = 477

 Score = 36.7 bits (81), Expect = 0.020
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = -1

Query: 259 WKLTPVV-LETGNVLLIENHEYGQSLKLDAHVDSYGDRLLWGNNGNVDGNPGYFGWVINA 83
           W   P++ L T +  L E++  G S +LD  V ++G+ +L+   GN+  N  Y+G  +NA
Sbjct: 320 WLKNPILNLMTSSEFLTEDYGSGPSWRLDTVVSTHGNLVLYDRYGNLT-NVIYYGMNVNA 378

Query: 82  WQ 77
            Q
Sbjct: 379 TQ 380


>Z70750-10|CAA94746.1|  439|Caenorhabditis elegans Hypothetical
           protein C50F4.12 protein.
          Length = 439

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 561 EIKLITKQERVKIIGRYYNQALKLDSNVDSYNNRLAWGDSQ 439
           E+K  TK ER+KI+  Y      L+ NV   ++RL W   Q
Sbjct: 232 ELKKFTKSERLKIVDEY---RYWLNCNVQLIDSRLGWLQQQ 269


>Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = -3

Query: 323 VEEXRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRAESEAGRARGQL 159
           VEE +++ES  FQ L  ER  ++ +A    DRQ     E   +A  EA  A+ +L
Sbjct: 268 VEEVQKRESEIFQSLVEERERLQREAEIMEDRQNPDWEEQERKAR-EAENAKREL 321


>Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = -3

Query: 323 VEEXRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRAESEAGRARGQL 159
           VEE +++ES  FQ L  ER  ++ +A    DRQ     E   +A  EA  A+ +L
Sbjct: 268 VEEVQKRESEIFQSLVEERERLQREAEIMEDRQNPDWEEQERKAR-EAENAKREL 321


>Z77656-1|CAB01141.2|  350|Caenorhabditis elegans Hypothetical
           protein F07B10.2 protein.
          Length = 350

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = +1

Query: 292 PTLSCLRYSSTFMSSFRYIVYSVFNILYSSLLFSHTGINFQLTL*LILSLAVSPG 456
           PT  C  Y+ +F       +Y    +    L+   TG  F   L LILSLA S G
Sbjct: 94  PTTYCWCYAMSFSLFALQFLYRYVAVCKPHLVVFFTGCYFYYWLALILSLATSWG 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,778,448
Number of Sequences: 27780
Number of extensions: 376948
Number of successful extensions: 1099
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)