Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J23
         (814 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    24   1.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.4  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   5.9  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 352 YSVFNILYSSLLFSHTGINFQLTL 423
           Y +FN+  S LLF   G+ F+L++
Sbjct: 70  YYLFNLAVSDLLFLILGLPFELSV 93


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = -2

Query: 513 YYN--QALKLDSNVDSYNNRLA 454
           +YN  QA  +++N+DSY N  A
Sbjct: 57  WYNEGQAWNIEANIDSYTNAAA 78


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = -2

Query: 513 YYN--QALKLDSNVDSYNNRLA 454
           +YN  QA  +++N+DSY N  A
Sbjct: 57  WYNEGQAWNIEANIDSYTNAAA 78


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 298 AWGSNNSNEKGHLWKLTP 245
           AW  +N   K  LW L P
Sbjct: 88  AWAKHNPRGKDALWSLVP 105


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -2

Query: 543 KQERVKIIGRYYNQALKLDSNVDSYNNR 460
           + +  KII    N+ +  ++N ++YNN+
Sbjct: 297 RSKEPKIISSLSNKTIHNNNNYNNYNNK 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,293
Number of Sequences: 438
Number of extensions: 4968
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)