Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_J22
(782 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 31 0.19
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 31 0.19
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 31 0.19
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 30 0.43
SPBC11G11.01 |fis1||mitochondrial fission protein Fis1 |Schizosa... 29 0.57
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 29 0.57
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 28 1.7
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 2.3
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 26 5.3
SPAC644.11c |||pyruvate dehydrogenase |Schizosaccharomyces pombe... 26 7.0
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 7.0
SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ... 26 7.0
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 26 7.0
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 26 7.0
SPCC757.02c |||epimarase |Schizosaccharomyces pombe|chr 3|||Manual 25 9.3
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 25 9.3
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 31.1 bits (67), Expect = 0.19
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 418 LSIDPRNVEGLVARGALYANSGTFKKAIEDFE 323
L ++P+NVE LV RG + SG KAI F+
Sbjct: 170 LRLNPKNVEALVLRGKVMYYSGENAKAITHFQ 201
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -3
Query: 333 KILRPXLKLNPNHANARKYLGETLVALGRSYEDENQITEAQKAYEDC 193
KI L+LNP + A G+ + G + + EA K DC
Sbjct: 164 KIAHDVLRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALKLDPDC 210
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 31.1 bits (67), Expect = 0.19
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 481 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 329
EG A + +A KA+ IDP + R A Y G F+ A+ED
Sbjct: 89 EGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVED 139
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 31.1 bits (67), Expect = 0.19
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = -2
Query: 478 GIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 323
G+ + K GR+ +A +A I+P N + G +Y +KKA++ ++
Sbjct: 506 GMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIGMIYERCKDYKKALDFYD 557
Score = 29.1 bits (62), Expect = 0.75
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = -2
Query: 451 HSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDF 326
HS+A +C+N+A+ +DP +G ++ + ++K+ F
Sbjct: 447 HSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSF 488
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 29.9 bits (64), Expect = 0.43
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -3
Query: 279 YLGETLVALGRSYED-ENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEP 103
Y+ E LG YE NQI++A AY+ + P + + L L+ ++
Sbjct: 650 YISEVWYDLGTLYESCHNQISDALDAYQRAAELDPTNPHIKARLQLLRGPNNEQHKIVNA 709
Query: 102 AELLLPGLTGAK 67
+P + AK
Sbjct: 710 PPSNVPNVQTAK 721
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 255 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTAS 121
+G YE + A++AYE LA P H + L +L + ++S
Sbjct: 518 IGHVYEQRKEYKLAKEAYERVLAETPNHAKVLQQLGWLCHQQSSS 562
>SPBC11G11.01 |fis1||mitochondrial fission protein Fis1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 29.5 bits (63), Expect = 0.57
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 475 IEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALY 365
+ H+K ++ E+ + LN LS DP + E L + LY
Sbjct: 86 LSHYKLKQYEESRRYLNMLLSKDPNSPEALKLKNRLY 122
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 29.5 bits (63), Expect = 0.57
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Frame = -2
Query: 709 SXKKTMDMKGENYEAILEKSPGFNNPNC----IQFLSEHLGIANMHCTNFSYLRGRFASS 542
S ++ K N+ + LE SPG N P+ L ++++ NF G S
Sbjct: 31 SPSSSIRKKKVNFSSELENSPGGNRPSFGLPKRGILKTSTPLSSIKQPNFQSFEGN--ES 88
Query: 541 EYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSI 410
E L++ Q+S F S E ++H + E + L+ L I
Sbjct: 89 EKETSLQELQSS---FCSGIENLQHVEKSARIETYSKLSSFLKI 129
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -3
Query: 240 EDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELL 91
EDEN K EDC A + F + SL ++S T + L + +LL
Sbjct: 684 EDENHRVHHVKVSEDCTATVSF---GKQSLHIVRSSVTLLETLDDYGKLL 730
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.5 bits (58), Expect = 2.3
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -3
Query: 246 SYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPGLT-GA 70
+Y+DEN + + D I E S+ F KSKT+ + I A + G GA
Sbjct: 889 NYDDENSLNRGGTSESDSEFIWDVDESNSGSIVFPKSKTSINLNNINSASASIMGSRFGA 948
Query: 69 KSYEMKEXP 43
M + P
Sbjct: 949 ADIFMSKRP 957
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -3
Query: 258 ALGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLL 88
AL Y + + K Y++ LAI P +E +L+++ +PL + LL
Sbjct: 81 ALAIVYRETKDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLL 137
>SPAC644.11c |||pyruvate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 326 KIFYGLFECSTIGVQCSSSNKTLYISRIYAQSFIQALK 439
++ YGLFE I + C S + +Y+ + + LK
Sbjct: 262 RLAYGLFEAPEIQIICDPSLEMMYVESHLNHAVFEILK 299
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 204 YEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAEL 94
+ED + E SLD LK+KT+ P++ EL
Sbjct: 445 WEDARYFSKENRELLRSLDSLKAKTSKKDPIVRRNEL 481
>SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 180 PFHEEAQNSLDFLKSKTTASKPLIEPAELLLPG 82
P+ E N+ D+L K +P P LL PG
Sbjct: 212 PWDEAISNTGDYLLYKKQCERPSYHPWNLLSPG 244
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 184 DS*AIFVSFLCFCYLVLVFI 243
D+ A F S+LCF +V+VFI
Sbjct: 511 DAGAFFQSYLCFPVVVIVFI 530
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 330 ILRPXLKLNPNHANARKYLGETLVALGRSYEDENQITEAQK 208
+L +K NP H A K+LG LG + EA K
Sbjct: 316 LLEQSVKENPQHFEAWKWLGRIHTLLGNESRVVEALLEAVK 356
>SPCC757.02c |||epimarase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 405
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 688 MKGENYEAILEKSPGFNNPNCIQFLSEHLGIANMHCTNFS 569
M E Y AI+ + G N I+ LSE +HC + S
Sbjct: 1 MAEEGYVAIVTGATGLNGAAIIKRLSEDDNCKTIHCISRS 40
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 463 KAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKA 338
K+G++S+A + + ++ RN G + G L G KKA
Sbjct: 53 KSGQYSQAELDAKRMIHLNARNARGYLRLGKLLQLDGFDKKA 94
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,012,139
Number of Sequences: 5004
Number of extensions: 61222
Number of successful extensions: 199
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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