BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_J20 (793 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z93242-2|CAI42725.1| 530|Homo sapiens retinoic acid induced 2 p... 33 1.6 BC027937-1|AAH27937.1| 530|Homo sapiens RAI2 protein protein. 32 2.1 AF136587-1|AAD33688.1| 530|Homo sapiens retinoic acid-induced p... 32 2.1 BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein ... 31 3.6 AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens ... 31 3.6 AK001021-1|BAA91470.1| 268|Homo sapiens protein ( Homo sapiens ... 30 8.3 >Z93242-2|CAI42725.1| 530|Homo sapiens retinoic acid induced 2 protein. Length = 530 Score = 32.7 bits (71), Expect = 1.6 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 689 PYPVTVHKPVPYEVKVPVDKPXQGRSREALSGPR 588 PYPV V PVP + +P+ P S+ + S P+ Sbjct: 233 PYPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPK 266 >BC027937-1|AAH27937.1| 530|Homo sapiens RAI2 protein protein. Length = 530 Score = 32.3 bits (70), Expect = 2.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 689 PYPVTVHKPVPYEVKVPVDKPXQGRSREALSGPR 588 PYPV V PVP + +P+ P S+ + S P+ Sbjct: 233 PYPVIVPLPVPVPIPIPIPVPQSSESKFSSSFPK 266 >AF136587-1|AAD33688.1| 530|Homo sapiens retinoic acid-induced protein protein. Length = 530 Score = 32.3 bits (70), Expect = 2.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 689 PYPVTVHKPVPYEVKVPVDKPXQGRSREALSGPR 588 PYPV V PVP + +P+ P S+ + S P+ Sbjct: 233 PYPVIVPLPVPVPIPIPIPVPQSSESKFSSSFPK 266 >BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein 9 protein. Length = 1031 Score = 31.5 bits (68), Expect = 3.6 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = -2 Query: 570 NLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTKE 469 +L S+RKS TP+KR+ ++ + SP RS KE Sbjct: 806 SLPPSNRKSSTPTKREIMLTPVTVAYSPKRSPKE 839 >AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens cDNA FLJ12954 fis, clone NT2RP2005491, weakly similar to PARAMYOSIN. ). Length = 692 Score = 31.5 bits (68), Expect = 3.6 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = -2 Query: 570 NLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTKE 469 +L S+RKS TP+KR+ ++ + SP RS KE Sbjct: 602 SLPPSNRKSSTPTKREIMLTPVTVAYSPKRSPKE 635 >AK001021-1|BAA91470.1| 268|Homo sapiens protein ( Homo sapiens cDNA FLJ10159 fis, clone HEMBA1003528. ). Length = 268 Score = 30.3 bits (65), Expect = 8.3 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = -3 Query: 704 PXM*KPYPVTVHKPVPYEVKVPVDKPXQGRSREALSGPR*SASTKTLRSHQEN 546 P + PYPV V PVP + +P+ + + L P + L S +EN Sbjct: 118 PTLLVPYPVIVPLPVPIPIPIPIPHVSDSKPPKKLLSPE-EPAVSELESVKEN 169 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 84,681,990 Number of Sequences: 237096 Number of extensions: 1558493 Number of successful extensions: 6777 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6696 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6777 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 9701808132 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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