Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J19
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.7  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   2.7  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    23   3.6  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   4.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 268  WKSSWLDRTACPAPTSTPSVRRPACT 191
            W ++   RT    PT+T +  RP  T
Sbjct: 1052 WTTTTTRRTTTTRPTTTSTTTRPTTT 1077


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 748 GVLMYGPPRXW 716
           G LMYG PR W
Sbjct: 157 GPLMYGQPRVW 167


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 268 WKSSWLDRTACPA 230
           W S WL+R A PA
Sbjct: 86  WVSFWLNRNATPA 98


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 760 EPPRGVLMYGPPRXWQNYAG 701
           +PP GVL +  P+  +N+ G
Sbjct: 8   QPPFGVLRFKAPQPPENWTG 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,328
Number of Sequences: 336
Number of extensions: 3046
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)