Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_J19
(773 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 196 2e-50
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 130 2e-30
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 5e-27
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 91 9e-19
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 79 3e-15
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 75 8e-14
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 71 8e-13
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 70 2e-12
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 67 2e-11
SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 62 4e-10
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 53 3e-07
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_732| Best HMM Match : AAA (HMM E-Value=0) 50 2e-06
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 46 3e-05
SB_58910| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10) 30 1.8
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 29 3.2
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 29 4.2
SB_44206| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10) 28 7.3
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 196 bits (478), Expect = 2e-50
Identities = 98/126 (77%), Positives = 103/126 (81%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PGCGKTMLAKAVAHH TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P
Sbjct: 207 PGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEI 266
Query: 546 XXXATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPCVAKTWPS 367
ATKRFDAQTGADREVQRILLELLNQMDGFDQ NVKVIMATNR DTLDP + + P
Sbjct: 267 DAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRQDTLDPALLR--PG 324
Query: 366 RQKNRV 349
R ++
Sbjct: 325 RLDRKI 330
Score = 89.0 bits (211), Expect = 4e-18
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = -1
Query: 392 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSDEVDLEEFV 255
PALLRPGRLDRKIEFPLPDRRQKRLIFSTIT KMNLS+EVDLE+ +
Sbjct: 318 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDLEDCI 363
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = -2
Query: 772 QIGIEPPRGVLMYGPP 725
QIGI+PPRGVL+YGPP
Sbjct: 192 QIGIDPPRGVLLYGPP 207
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 130 bits (313), Expect = 2e-30
Identities = 64/126 (50%), Positives = 81/126 (64%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PG GKT+ A+AVA+ A FIRV+GSE VQKY+GEG RMVR++F +A+
Sbjct: 127 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIVFFDEI 186
Query: 546 XXXATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPCVAKTWPS 367
RFD G D EVQR +LEL+NQ+DGFD N+KV+MATNR DTLDP + + P
Sbjct: 187 DAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMR--PG 244
Query: 366 RQKNRV 349
R +V
Sbjct: 245 RLDRKV 250
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1
Query: 392 PALLRPGRLDRKIEFPLPD 336
PAL+RPGRLDRK+EF LPD
Sbjct: 238 PALMRPGRLDRKVEFGLPD 256
Score = 33.1 bits (72), Expect = 0.26
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = -2
Query: 769 IGIEPPRGVLMYGPP 725
+GIEPP+GVL++GPP
Sbjct: 113 LGIEPPKGVLLFGPP 127
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 118 bits (284), Expect = 5e-27
Identities = 62/130 (47%), Positives = 81/130 (62%), Gaps = 14/130 (10%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA------------- 586
PG GKT+LA+AVAHH FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 220 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMARHGENLQAMYFVD 279
Query: 585 -KENSPXXXXXXXXXXXATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNR 409
+E++P + R + +G D EVQR +LELLNQ+DGF+ T N+KVIMATNR
Sbjct: 280 SREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNR 339
Query: 408 ADTLDPCVAK 379
D LD + +
Sbjct: 340 IDILDSALLR 349
Score = 36.3 bits (80), Expect(2) = 6e-04
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -1
Query: 389 ALLRPGRLDRKIEFPLPD 336
ALLRPGR+DRKIEFP P+
Sbjct: 346 ALLRPGRIDRKIEFPPPN 363
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = -2
Query: 769 IGIEPPRGVLMYGPP 725
+GI+ P+GVL+YGPP
Sbjct: 206 LGIDQPKGVLLYGPP 220
Score = 24.6 bits (51), Expect(2) = 6e-04
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = -1
Query: 215 ICQEAGMHAVQGKQIYCPSLKISKRVTRI 129
+C EAGM+A++ ++++ VT++
Sbjct: 367 VCTEAGMYALRERRVHVTQEDFEMAVTKV 395
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/88 (47%), Positives = 58/88 (65%)
Frame = -3
Query: 639 QKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXATKRFDAQTGADREVQRILLELLNQM 460
+ ++G+G ++VRD F LAKE +P TKRFD++ DREVQR +LELLNQ+
Sbjct: 165 EMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 224
Query: 459 DGFDQTTNVKVIMATNRADTLDPCVAKT 376
DGF ++KVI ATNR D LDP + ++
Sbjct: 225 DGFSSHHDIKVIAATNRVDILDPALLRS 252
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = -1
Query: 392 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSDEVDLEEFVARPDRVSGADINAI 213
PALLR GRLDRKIEFP PD+ + I + KMN+S +V+ +E D +GA + A+
Sbjct: 247 PALLRSGRLDRKIEFPNPDQEARARILQIHSRKMNVSGDVNFDELSRCTDDFNGAMLKAV 306
Query: 212 CQEAGMHAVQ 183
C EAGM A++
Sbjct: 307 CVEAGMIALR 316
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 91.1 bits (216), Expect = 9e-19
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PG GKT+LAKAVA F+ + GSEF++ ++G GP VRD+F A++N+P
Sbjct: 90 PGTGKTLLAKAVAGEAGVPFLSISGSEFLEMFVGVGPARVRDLFAQARKNAPCIIFIDEI 149
Query: 546 XXXATKR-FDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPCVAK 379
R Q G E + L +LL +MDGF +TNV V+ TNR D LDP + +
Sbjct: 150 DAVGRARGRGGQFGGHDERENTLNQLLVEMDGFSSSTNVVVLSGTNRPDVLDPALLR 206
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -1
Query: 392 PALLRPGRLDRKIEFPLPDRRQKRLIFST--ITTKMNLSDEVDLEEFVARPDRVSGADIN 219
PALLRPGR DR+I P PD + + IF K N+ +E + A +GADI
Sbjct: 202 PALLRPGRFDRQIHLPAPDIKGRCSIFKVHLKPIKKNVDEEKLARKMAALTPGFTGADIA 261
Query: 218 AICQEAGMHAVQ 183
+C EA + A +
Sbjct: 262 NVCNEAALIAAR 273
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 79.4 bits (187), Expect = 3e-15
Identities = 42/116 (36%), Positives = 60/116 (51%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PGCGKT+LAKA+A+ A FI + G E + + GE VRDVF A+ +P
Sbjct: 353 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARSAAPCVLFFDEL 412
Query: 546 XXXATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPCVAK 379
A R R++ ++L +MDG + NV +I ATNR D +DP + +
Sbjct: 413 DSIAKSRGGNVGDGGGAADRVINQVLTEMDGMNVKKNVFIIGATNRPDIIDPAILR 468
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -1
Query: 389 ALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSDEVDLEEFVARPDRVSGAD 225
AL R GR DR+++ +PD + I T M L D+VDLE+ + D + D
Sbjct: 213 ALRRFGRFDREVDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIREKMDLIDLED 267
Score = 36.7 bits (81), Expect = 0.021
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = -1
Query: 392 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSDEVDLEEFVARPDRVSGADINAI 213
PA+LRPGRLD+ I PLPD +VDL+ SGAD+ I
Sbjct: 464 PAILRPGRLDQLIYIPLPD-----------------DGDVDLDYVAKVTHGFSGADLTEI 506
Query: 212 CQEAGMHAVQ 183
CQ A A++
Sbjct: 507 CQRACKLAIR 516
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = -3
Query: 492 QRILLELLNQMDGFDQTTNVKVIMATNRADTLD 394
+RI+ +LL MDG Q ++V V+ ATNR +++D
Sbjct: 179 RRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVD 211
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 74.5 bits (175), Expect = 8e-14
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PG GKT+LAKAVA F+ + GS+FV+ + G G VRD+F A++ +P
Sbjct: 167 PGTGKTLLAKAVATEADVPFLSMAGSDFVEMFAGVGSARVRDLFTRARKLAPCIVYIDEV 226
Query: 546 XXXATKRFDAQT-GADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 394
R +++ G E + L +LL +MDG + V ++ +TNRAD LD
Sbjct: 227 DAIGRSRKSSRSMGGHNEQENTLNQLLVEMDGMNTLDGVIMLASTNRADILD 278
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = -1
Query: 389 ALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSDEVD--LEEFVARPDRVSGADINA 216
ALLRPGR DR I LP ++ IF K+ L +D + SGADI
Sbjct: 280 ALLRPGRFDRHIAIDLPTLPERMEIFEVHLKKLTLKRSIDQYTKRLAELTPGHSGADIAN 339
Query: 215 ICQEAGMHAVQ 183
IC EA +HA +
Sbjct: 340 ICNEAALHAAR 350
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 73.7 bits (173), Expect = 1e-13
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PG GKT++AKAVA + F+ V G E + Y+G+ + VR+VF A+ SP
Sbjct: 853 PGTGKTLMAKAVATECSLNFLSVKGPELINMYVGQSEQNVREVFSRAQAASPCVIFFDEL 912
Query: 546 XXXATKRFDAQTGADREV-QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPCVAK 379
A R ++G V R++ +LL ++DG T +V VI ATNR D LDP + +
Sbjct: 913 DSLAPNR--GRSGDSGGVMDRVVAQLLAELDGLHSTCDVFVIGATNRPDLLDPALLR 967
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = -1
Query: 392 PALLRPGRLDRKIEFPLPDRRQKRL-IFSTITTKMNLSDEVDLEEFVAR-PDRVSGADIN 219
PALLRPGR D+ + + + +L + +T K S + LEEF + P ++GAD+
Sbjct: 963 PALLRPGRFDKLLYLGVSEDHHAQLSVLKALTRKFTFSADFRLEEFANKLPLNLTGADLY 1022
Query: 218 AICQEAGMHAVQ 183
A+ +A + A++
Sbjct: 1023 AMASDALLQAMR 1034
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 71.3 bits (167), Expect = 8e-13
Identities = 43/131 (32%), Positives = 62/131 (47%)
Frame = -3
Query: 771 KSVLSLLGXCSCMDHPGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFR 592
K L L G PG GKT+LA VA FI + G E + KY+G + VRD+F
Sbjct: 695 KCPLRLRGGLLLYGPPGTGKTLLAGVVAKECGLNFISIKGPELLSKYIGASEQAVRDMFT 754
Query: 591 LAKENSPXXXXXXXXXXXATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATN 412
A+ P A +R TG R++ +LL Q+DG + V ++ AT+
Sbjct: 755 RAQSAKPCILFFDEFDSLAPRRGHDSTGV---TDRVVNQLLTQLDGVEGLKGVYILAATS 811
Query: 411 RADTLDPCVAK 379
R D +DP + +
Sbjct: 812 RPDLIDPALLR 822
Score = 58.0 bits (134), Expect = 8e-09
Identities = 25/69 (36%), Positives = 43/69 (62%)
Frame = -1
Query: 392 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSDEVDLEEFVARPDRVSGADINAI 213
PALLRPGRLD+ + P+PD+ +R +F ++ + L+D++DL+ +GADI A+
Sbjct: 818 PALLRPGRLDKCVYCPIPDQGDRREVFRALSHDLPLADDIDLDSISDSCHHFTGADIKAL 877
Query: 212 CQEAGMHAV 186
+ + A+
Sbjct: 878 LYNSQLEAI 886
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 70.1 bits (164), Expect = 2e-12
Identities = 39/116 (33%), Positives = 60/116 (51%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PGC KT++A+A+A FI + G E K++GE + VR+VF A+ +P
Sbjct: 580 PGCSKTLIARALATESGLNFIAIKGPELFSKWVGESEKAVREVFLKARATAPSIVFFDEL 639
Query: 546 XXXATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPCVAK 379
A +R TG R+L +LL ++DG + +V I ATNR D +D + +
Sbjct: 640 DAIAGQR--NSTGGSDVNDRVLTQLLTELDGVETLKDVIFIAATNRPDMIDKALMR 693
Score = 68.1 bits (159), Expect = 7e-12
Identities = 39/115 (33%), Positives = 56/115 (48%)
Frame = -3
Query: 723 GCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXX 544
G GKTM+A+AVA+ F + G E + +Y GE +R++F A+ SP
Sbjct: 300 GTGKTMIARAVANETGVHFFCINGPEVLSRYYGETEARLREIFTEAQNKSPSIVFIDELD 359
Query: 543 XXATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPCVAK 379
+R Q +R V LL L++ M T V V+ ATNR D LDP + +
Sbjct: 360 ALCPRRDKVQNEFERRVVATLLTLMDGMHMKSTDTYVMVLAATNRPDALDPALRR 414
Score = 60.1 bits (139), Expect = 2e-09
Identities = 35/100 (35%), Positives = 54/100 (54%)
Frame = -1
Query: 389 ALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSDEVDLEEFVARPDRVSGADINAIC 210
AL+RPGR+DR I PLP +R I + +DLE+ V R + SGA+I A+C
Sbjct: 690 ALMRPGRVDRLIYVPLPCWDTRRHILEIHLARTPCEGSLDLEDLVERTEGYSGAEIAAVC 749
Query: 209 QEAGMHAVQGKQIYCPSLKISKRVTRITSRKMRANMNFIN 90
+EA + A+Q + I S+++ + + K R + IN
Sbjct: 750 REAALAALQ-ENIQAESVELRHFEKALMAVKPRTSTQMIN 788
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -1
Query: 392 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKM--NLSDEVDLEEFVARPDRVSGADIN 219
PAL RPGR DR+IE +P +R I T+ + +L DE D+ GAD+
Sbjct: 410 PALRRPGRFDREIEIGIPSVTDRRDILVTLLKNVPHSLHDE-DISSLAESAHGYVGADLA 468
Query: 218 AICQEAGMHA 189
A C+EA ++A
Sbjct: 469 AACKEASLYA 478
Score = 35.1 bits (77), Expect = 0.064
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -2
Query: 772 QIGIEPPRGVLMYGPP 725
++GI PPRG+LMYGPP
Sbjct: 565 RLGIRPPRGILMYGPP 580
Score = 29.1 bits (62), Expect = 4.2
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -2
Query: 766 GIEPPRGVLMYGP 728
G+ PPRG+L+YGP
Sbjct: 286 GVPPPRGILLYGP 298
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 69.7 bits (163), Expect = 2e-12
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PGCGKT+LAKA+A+ FI V G E + Y+GE R VR VF+ A+ ++P
Sbjct: 26 PGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDEL 85
Query: 546 XXXATKRF-DAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 394
+R +++G+ R++ +LL +MDG +V ++ ATN+ D
Sbjct: 86 DSLCPRRSGSSESGSS---VRVVNQLLTEMDGLQARKHVFIMGATNKPGIRD 134
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 66.9 bits (156), Expect = 2e-11
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PGCGKT+LA A+A F+++ +E V GE VR++F A +P
Sbjct: 719 PGCGKTLLAHAIAGELEMPFLKLAATEIVSGVSGESEEKVRELFTSAVAQAPCILFLDEI 778
Query: 546 XXXATKRFDAQTGADREVQRILLELLNQMDGFDQT--TNVKVIMATNRADTLDPCVAK 379
KR +A +R RI+ +LL+ MD + +V VI ATNR D+LDP + +
Sbjct: 779 DAITPKRENASKDMER---RIVSQLLSCMDDLNNNPDAHVLVIGATNRPDSLDPALRR 833
>SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 64.5 bits (150), Expect = 9e-11
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = -1
Query: 371 RLDRKIEFPLPDRRQKRLIFSTITTKMNLSDEVDLEEFVARPDRVSGADI 222
R+DRKIEFP+PD + KR IF+ T +M L+++V+LEEF+ D +SGADI
Sbjct: 2 RIDRKIEFPMPDEKTKRRIFNIHTQRMTLAEDVNLEEFIMAKDDLSGADI 51
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 62.5 bits (145), Expect = 4e-10
Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = -3
Query: 723 GCGKTMLAKAVAHHXT-AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
G GK+ LAKAVA + FI V S+ V K+LGE R+V+ +F LA+EN P
Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSSDLVSKWLGESERLVKQLFELARENKPSIIFIDEV 234
Query: 546 XXXATKRFDAQTGADREVQRILLELLNQMDGFD-QTTNVKVIMATNRADTLDPCVAKTWP 370
R + ++ + R RI E L QM G V V+ ATN TLD + + +
Sbjct: 235 DSLCGSRSENESESAR---RIKTEFLVQMQGVGVDNDQVLVLGATNIPWTLDSAIRRRFE 291
Query: 369 SR 364
R
Sbjct: 292 KR 293
Score = 33.1 bits (72), Expect = 0.26
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -1
Query: 404 IHWTPALLRPGRLDRKIEFPLPDRRQKRLIFST-ITTKMNLSDEVDLEEFVARPDRVSGA 228
I WT R +++I PLP++ + +F + L ++++ + D SGA
Sbjct: 278 IPWTLDSAIRRRFEKRIYIPLPEQAARSKMFELHLGGSKTLLGAQEIKQLGQKTDGYSGA 337
Query: 227 DINAICQEAGMHAVQGKQ 174
DI+ + +EA M V+ Q
Sbjct: 338 DISVVVREALMMPVRKVQ 355
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 60.1 bits (139), Expect = 2e-09
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PG GKTMLAKAVA F V S KY GE ++VR +F +A+ +P
Sbjct: 292 PGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRILFEMARFYAPSTIFVDEI 351
Query: 546 XXXATKR-FDAQTGADREVQRILLELLNQMDGF------DQTTNVKVIMATNRADTLDPC 388
++R D++ A R R+ ELL QMDG +T V V+ ATN LD
Sbjct: 352 DSICSRRGSDSEHEASR---RVKSELLVQMDGVGGSSDDGETKQVMVLAATNFPWDLDEA 408
Query: 387 VAKTWPSR 364
+ + R
Sbjct: 409 LRRRLEKR 416
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 52.8 bits (121), Expect = 3e-07
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXT-----AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXX 562
PG GKT++A+A+A+ + +F G++ + K++GE R +R +F A P
Sbjct: 927 PGTGKTLVARALANECSQGDKKVSFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSII 986
Query: 561 XXXXXXXXATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPCVA 382
A R Q D+ I+ LL MDG D V +I ATNR D +DP +
Sbjct: 987 FFDEIDGLAPVRSSRQ---DQIHSSIVSTLLALMDGLDSRGEVVIIGATNRIDAIDPALR 1043
Query: 381 K 379
+
Sbjct: 1044 R 1044
Score = 52.4 bits (120), Expect = 4e-07
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -1
Query: 392 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKM--NLSDEVDLEEFVARPDRVSGADIN 219
PAL RPGR DR+ +F LPDR +R I S T + LS + E GADI
Sbjct: 1040 PALRRPGRFDREFQFALPDRDARRSILSIHTREWEPRLSQRF-ISELADYCVGYCGADIK 1098
Query: 218 AICQEAGMHAVQGK--QIYCPSLKI 150
A+C EA + A++ + Q+Y S K+
Sbjct: 1099 ALCTEAALCALRRRYPQVYTSSRKL 1123
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 763 IEPPRGVLMYGPP 725
I PPRGVL +GPP
Sbjct: 915 ITPPRGVLFFGPP 927
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYL 628
PG GKT+LAKAVA+ +A F+RVVGSE +QKYL
Sbjct: 423 PGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 455
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = -2
Query: 772 QIGIEPPRGVLMYGPP 725
++GI+PP+GV++YG P
Sbjct: 408 EMGIKPPKGVILYGQP 423
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSP 571
PG GKT+LAKAVA F GSEF + ++G G VR++F AKE++P
Sbjct: 173 PGTGKTLLAKAVAGEAGVPFFFCSGSEFDEMFVGVGAARVRNLFAAAKEHAP 224
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 50.4 bits (115), Expect = 2e-06
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVV-GSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXX 550
PG GKT++A+ + +++ G E + K++GE +R +F A+E
Sbjct: 191 PGTGKTLMARQIGTMLNTREPKIISGPEVLNKFVGESEANIRKLFAEAEEEQKRFGDNSA 250
Query: 549 XXXXATKRFDA--------QTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 394
FDA TG ++ +LL ++DG +Q NV +I TNR D +D
Sbjct: 251 LHLIIFDEFDAVCKSRYSYNTGGTGVQDSVVNQLLAKIDGVEQLNNVLLIGMTNRRDLID 310
Query: 393 PCVAK 379
+ +
Sbjct: 311 DALLR 315
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = -1
Query: 389 ALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMN----LSDEVDLEEFVARPDRVSGADI 222
ALLRPGRL+ ++E LPD + I T KM L+D+VDL E + +GA+I
Sbjct: 312 ALLRPGRLEVQVEIGLPDEEGRVQILKIHTAKMRENKVLADDVDLAELATQTKNFTGAEI 371
Query: 221 NAICQEA 201
+ + A
Sbjct: 372 EGLVRAA 378
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 48.0 bits (109), Expect = 8e-06
Identities = 32/116 (27%), Positives = 47/116 (40%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PG GKT+L + G++ + GE +R VF A+ S
Sbjct: 254 PGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNKARYASRFGPCVLFI 313
Query: 546 XXXATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPCVAK 379
+ + E RI+ +LL MDG + V VI ATNR + LDP + +
Sbjct: 314 DELDALCPKRGSSGNEEENRIVAQLLTLMDGLESRGRVIVIGATNRPNALDPALRR 369
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = -1
Query: 392 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSDEVDLEEFVARPDRVSGADINAI 213
PAL RPGR DR++ +P Q+ I +NLS +VDL GAD+ ++
Sbjct: 365 PALRRPGRFDREVVIGVPSAGQRLDILRAHCKPINLSVDVDLTHLAEITVGYVGADLASL 424
Query: 212 CQEAGMHAVQ 183
CQ+A A++
Sbjct: 425 CQQAAFAALK 434
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = -1
Query: 389 ALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSDEVDLEEFVARPDRVSGADINAIC 210
ALLRPGR+D I P PD + + I T L+ +VDL + SGAD+ +C
Sbjct: 714 ALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIAEGTELYSGADLENLC 773
Query: 209 QE 204
+E
Sbjct: 774 RE 775
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/98 (27%), Positives = 43/98 (43%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PGC KT L +A A F+ + ++ Y+G+ R +R++ P
Sbjct: 527 PGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLRELVL----QLPLLLFLDEL 582
Query: 546 XXXATKRFDAQTGADREVQRILLELLNQMDGFDQTTNV 433
A KR + G + R+L LLN+MDG + N+
Sbjct: 583 DSLAGKRGN-NLGME---TRLLATLLNEMDGVGVSANI 616
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -2
Query: 772 QIGIEPPRGVLMYGPP 725
++G+ PRGVL+YGPP
Sbjct: 512 RMGLRRPRGVLLYGPP 527
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 46.4 bits (105), Expect = 3e-05
Identities = 29/98 (29%), Positives = 47/98 (47%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXX 547
PGC KT L +A A F+ + ++ Y+G+ R +R++F A+ +P
Sbjct: 56 PGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLRELFLKARATAPAILFLDEL 115
Query: 546 XXXATKRFDAQTGADREVQRILLELLNQMDGFDQTTNV 433
A KR + G + R+L LLN+MDG + N+
Sbjct: 116 DSLAGKRGN-NLGME---TRLLATLLNEMDGVGVSANI 149
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = -1
Query: 389 ALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSDEVDLEEFVARPDRVSGADINAIC 210
ALLRPGR+D I P PD + + I T L+ +VDL + SGAD+ +C
Sbjct: 247 ALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIAEGTELYSGADLENLC 306
Query: 209 QE 204
+E
Sbjct: 307 RE 308
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -2
Query: 772 QIGIEPPRGVLMYGPP 725
++G+ PRGVL+YGPP
Sbjct: 41 RMGLRRPRGVLLYGPP 56
>SB_58910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = -1
Query: 272 DLEEFVARPDRVSGADINAICQEAGMHAVQGKQIYCPSLKISKRVTRIT-SRKMRANMNF 96
D E V D +GAD+ +C EAGM A++G++ Y K V +++ ++K+ + +++
Sbjct: 115 DYEAVVKLSDGFNGADLRNVCTEAGMFAIRGERDYVIEEDFMKAVRKVSDNKKLESKLDY 174
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 36.7 bits (81), Expect = 0.021
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFV 640
PGCGKT+LAKA+A+ FI V G E +
Sbjct: 26 PGCGKTLLAKAIANESGINFISVKGPELL 54
>SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10)
Length = 280
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 723 GCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLGEGP 616
G GKT K + HH TA + S+ + LG GP
Sbjct: 242 GSGKTESTKLIVHHLTALSRKTQASDVEKTILGVGP 277
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -2
Query: 772 QIGIEPPRGVLMYGPP 725
++GI PP+G L++GPP
Sbjct: 163 RVGIAPPKGCLLFGPP 178
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 726 PGCGKTMLAKAVAHHXTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAK 583
PG GKTM AK++A H + + G + V +G EG + VF A+
Sbjct: 338 PGTGKTMFAKSLARHSGMDYAVMTGGDVVP--MGKEGVTAMHKVFDWAE 384
>SB_44206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Frame = +3
Query: 102 HIRSHLS*CYSCNPFRNL*XR-TIYLFSLXSVH-AGLLTDGVDVGAGHA----VRSSHEL 263
HI+ + C CN FRN R T++ L + AG+ TD + AGH+ V +
Sbjct: 431 HIKDRVRSCQICNAFRNQQQRETLHPHDLPGLPVAGVGTDLFEF-AGHSPTDVVDFYSKY 489
Query: 264 FQIHFIRKVH 293
F++ +R VH
Sbjct: 490 FEVELLRAVH 499
>SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10)
Length = 1514
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 271 IWKSSWLDRTACPAP-TSTPSVRRPACT 191
+WK W ACP P T+ VR PA T
Sbjct: 14 LWKHGWPSVLACPRPLTAVAQVRIPAQT 41
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,577,586
Number of Sequences: 59808
Number of extensions: 407674
Number of successful extensions: 1093
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -