Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_J18
(858 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 282 2e-76
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 282 2e-76
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 282 2e-76
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 280 1e-75
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 280 1e-75
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 277 9e-75
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 180 8e-46
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 100 1e-21
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 98 6e-21
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 98 8e-21
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 98 8e-21
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 98 8e-21
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 98 8e-21
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 95 4e-20
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 95 4e-20
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 95 5e-20
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 52 5e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 49 3e-06
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.32
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 30 1.7
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.7
At2g46530.2 68415.m05803 transcriptional factor B3 family protei... 29 3.0
At2g46530.1 68415.m05802 transcriptional factor B3 family protei... 29 3.0
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 29 4.0
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 5.2
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.9
At1g68080.1 68414.m07777 expressed protein 28 6.9
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.9
At3g26855.1 68416.m03360 hypothetical protein 28 9.1
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 282 bits (691), Expect = 2e-76
Identities = 123/144 (85%), Positives = 134/144 (93%)
Frame = -1
Query: 570 ASSPPXQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 391
A P M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 390 INYQPPTVVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 211
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 210 EGEFSEAREDLAALEKDYEEVGMD 139
EGEFSEAREDLAALEKDYEEVG +
Sbjct: 415 EGEFSEAREDLAALEKDYEEVGAE 438
Score = 92.3 bits (219), Expect = 4e-19
Identities = 46/64 (71%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
SS+T SLRF GA NVD+TE + YPRIHF L +YAPVISAEKA+HEQLSVAEITN+
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 568 FEPA 557
FEPA
Sbjct: 296 FEPA 299
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 282 bits (691), Expect = 2e-76
Identities = 123/144 (85%), Positives = 134/144 (93%)
Frame = -1
Query: 570 ASSPPXQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 391
A P M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 390 INYQPPTVVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 211
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 210 EGEFSEAREDLAALEKDYEEVGMD 139
EGEFSEAREDLAALEKDYEEVG +
Sbjct: 415 EGEFSEAREDLAALEKDYEEVGAE 438
Score = 92.3 bits (219), Expect = 4e-19
Identities = 46/64 (71%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
SS+T SLRF GA NVD+TE + YPRIHF L +YAPVISAEKA+HEQLSVAEITN+
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 568 FEPA 557
FEPA
Sbjct: 296 FEPA 299
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 282 bits (691), Expect = 2e-76
Identities = 123/144 (85%), Positives = 134/144 (93%)
Frame = -1
Query: 570 ASSPPXQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 391
A P M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 390 INYQPPTVVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 211
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 210 EGEFSEAREDLAALEKDYEEVGMD 139
EGEFSEAREDLAALEKDYEEVG +
Sbjct: 415 EGEFSEAREDLAALEKDYEEVGAE 438
Score = 92.3 bits (219), Expect = 4e-19
Identities = 46/64 (71%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
SS+T SLRF GA NVD+TE + YPRIHF L +YAPVISAEKA+HEQLSVAEITN+
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 568 FEPA 557
FEPA
Sbjct: 296 FEPA 299
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 280 bits (686), Expect = 1e-75
Identities = 121/141 (85%), Positives = 131/141 (92%)
Frame = -1
Query: 561 PPXQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 382
P M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINY
Sbjct: 298 PASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINY 357
Query: 381 QPPTVVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 202
QPPTVVPGGDLAKVQRAVCM+SN T +AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGE
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 201 FSEAREDLAALEKDYEEVGMD 139
FSEAREDLAALEKDYEEVG +
Sbjct: 418 FSEAREDLAALEKDYEEVGAE 438
Score = 90.6 bits (215), Expect = 1e-18
Identities = 46/64 (71%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
SS+T SLRF GA NVD+TE + YPRIHF L +YAPVISA KAYHEQLSV EITNA
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAV 295
Query: 568 FEPA 557
FEPA
Sbjct: 296 FEPA 299
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 280 bits (686), Expect = 1e-75
Identities = 121/141 (85%), Positives = 131/141 (92%)
Frame = -1
Query: 561 PPXQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 382
P M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINY
Sbjct: 298 PASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINY 357
Query: 381 QPPTVVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 202
QPPTVVPGGDLAKVQRAVCM+SN T +AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGE
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 201 FSEAREDLAALEKDYEEVGMD 139
FSEAREDLAALEKDYEEVG +
Sbjct: 418 FSEAREDLAALEKDYEEVGAE 438
Score = 90.6 bits (215), Expect = 1e-18
Identities = 46/64 (71%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
SS+T SLRF GA NVD+TE + YPRIHF L +YAPVISA KAYHEQLSV EITNA
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAV 295
Query: 568 FEPA 557
FEPA
Sbjct: 296 FEPA 299
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 277 bits (678), Expect = 9e-75
Identities = 121/151 (80%), Positives = 131/151 (86%)
Frame = -1
Query: 597 FPSPRSQTHASSPPXQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 418
F P T P M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KRTIQFVD
Sbjct: 286 FSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVD 345
Query: 417 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFV 238
WCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN T +AE ++R+DHKFDLMY+KRAFV
Sbjct: 346 WCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFV 405
Query: 237 HWYVGEGMEEGEFSEAREDLAALEKDYEEVG 145
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
Score = 83.0 bits (196), Expect = 2e-16
Identities = 41/64 (64%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
SS+T SLRF GA NVD+TE + YPRIHF L +YAPVIS+ KAYHEQ SV EIT +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSV 295
Query: 568 FEPA 557
FEP+
Sbjct: 296 FEPS 299
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 180 bits (439), Expect = 8e-46
Identities = 77/92 (83%), Positives = 84/92 (91%)
Frame = -1
Query: 570 ASSPPXQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 391
A P M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 390 INYQPPTVVPGGDLAKVQRAVCMLSNTTTIAE 295
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386
Score = 92.3 bits (219), Expect = 4e-19
Identities = 46/64 (71%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
SS+T SLRF GA NVD+TE + YPRIHF L +YAPVISAEKA+HEQLSVAEITN+
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 568 FEPA 557
FEPA
Sbjct: 296 FEPA 299
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 100 bits (239), Expect = 1e-21
Identities = 45/133 (33%), Positives = 76/133 (57%)
Frame = -1
Query: 549 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 370
M DPRHG+Y+ ++RG + K+V+ I ++ K + FV+W P K + PPT
Sbjct: 301 MCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT 360
Query: 369 VVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 190
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 361 --------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 412
Query: 189 REDLAALEKDYEE 151
++ L +Y++
Sbjct: 413 ESNMNDLVSEYQQ 425
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
S +T SLRF G N DL + +PR+HF +V +AP+ S + L+V E+T
Sbjct: 235 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 294
Query: 568 FE 563
++
Sbjct: 295 WD 296
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 98.3 bits (234), Expect = 6e-21
Identities = 45/133 (33%), Positives = 75/133 (56%)
Frame = -1
Query: 549 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 370
M DPRHG+Y+ ++RG + K+V+ I I+ K + FV+W P K + PP
Sbjct: 301 MCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPK 360
Query: 369 VVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 190
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 361 --------GLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 412
Query: 189 REDLAALEKDYEE 151
++ L +Y++
Sbjct: 413 ESNMNDLVAEYQQ 425
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
S +T SLRF G N DL + +PR+HF +V +AP+ S + L+V E+T
Sbjct: 235 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 294
Query: 568 FE 563
++
Sbjct: 295 WD 296
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 97.9 bits (233), Expect = 8e-21
Identities = 44/133 (33%), Positives = 76/133 (57%)
Frame = -1
Query: 549 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 370
M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 300 MCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
Query: 369 VVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 190
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 360 --------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 REDLAALEKDYEE 151
++ L +Y++
Sbjct: 412 ESNMNDLVSEYQQ 424
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
S +T LRF G N DL + +PR+HF +V +AP+ S + L+V E+T
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 568 FE 563
++
Sbjct: 294 WD 295
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 97.9 bits (233), Expect = 8e-21
Identities = 44/133 (33%), Positives = 76/133 (57%)
Frame = -1
Query: 549 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 370
M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 300 MCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
Query: 369 VVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 190
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 360 --------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 REDLAALEKDYEE 151
++ L +Y++
Sbjct: 412 ESNMNDLVSEYQQ 424
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
S +T LRF G N DL + +PR+HF +V +AP+ S + L+V E+T
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 568 FE 563
++
Sbjct: 294 WD 295
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 97.9 bits (233), Expect = 8e-21
Identities = 44/133 (33%), Positives = 76/133 (57%)
Frame = -1
Query: 549 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 370
M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 300 MCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
Query: 369 VVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 190
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 360 --------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 REDLAALEKDYEE 151
++ L +Y++
Sbjct: 412 ESNMNDLVSEYQQ 424
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
S +T LRF G N DL + +PR+HF +V +AP+ S + L+V E+T
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 568 FE 563
++
Sbjct: 294 WD 295
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 97.9 bits (233), Expect = 8e-21
Identities = 44/133 (33%), Positives = 76/133 (57%)
Frame = -1
Query: 549 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 370
M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 300 MCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
Query: 369 VVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 190
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 360 --------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 REDLAALEKDYEE 151
++ L +Y++
Sbjct: 412 ESNMNDLVSEYQQ 424
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
S +T LRF G N DL + +PR+HF +V +AP+ S + L+V E+T
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQM 293
Query: 568 FE 563
++
Sbjct: 294 WD 295
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 95.5 bits (227), Expect = 4e-20
Identities = 44/133 (33%), Positives = 76/133 (57%)
Frame = -1
Query: 549 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 370
M DPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 300 MCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVC----D 355
Query: 369 VVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 190
+ P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 356 IAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 REDLAALEKDYEE 151
++ L +Y++
Sbjct: 412 ESNMNDLVAEYQQ 424
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
S +T LRF G N DL + +PR+HF +V +AP+ S + LSV E+T
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQM 293
Query: 568 FE 563
++
Sbjct: 294 WD 295
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/133 (32%), Positives = 75/133 (56%)
Frame = -1
Query: 549 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 370
M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 300 MCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC----D 355
Query: 369 VVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 190
+ P G + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 356 IAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 REDLAALEKDYEE 151
++ L +Y++
Sbjct: 412 ESNMNDLVSEYQQ 424
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
S +T LRF G N DL + +PR+HF +V +AP+ S + L+V E+T
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 568 FE 563
++
Sbjct: 294 WD 295
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 95.1 bits (226), Expect = 5e-20
Identities = 43/133 (32%), Positives = 76/133 (57%)
Frame = -1
Query: 549 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 370
M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 300 MCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVC----D 355
Query: 369 VVPGGDLAKVQRAVCMLSNTTTIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 190
+ P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 356 IAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 REDLAALEKDYEE 151
++ L +Y++
Sbjct: 412 ESNMNDLVAEYQQ 424
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 745 SSITXSLRFXGAXNVDLTEXRXXXX-YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 569
S +T LRF G N DL + +PR+HF +V +AP+ S + LSV E+T
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQM 293
Query: 568 FE 563
++
Sbjct: 294 WD 295
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 52.0 bits (119), Expect = 5e-07
Identities = 37/165 (22%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Frame = -1
Query: 636 RQSSLPRRPTMNSFPSPRSQTHASSPPXQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 457
RQ+++ R+ T+ QT + KY++ + +G+V P V+ ++
Sbjct: 280 RQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESL 339
Query: 456 ATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTTIAEAWARLD 277
I+ ++ + F+DW P +V ++ + P V ++ + ML++ T+I ++R
Sbjct: 340 QRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL-----MLASHTSIRHLFSRCL 394
Query: 276 HKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 154
++D + K+AF+ Y M + EF E+R+ + +L +Y+
Sbjct: 395 SQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/165 (21%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Frame = -1
Query: 636 RQSSLPRRPTMNSFPSPRSQTHASSPPXQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 457
RQ+++ R+ T+ QT + KY++ + +G+V P V+ ++
Sbjct: 280 RQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESL 339
Query: 456 ATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTTIAEAWARLD 277
I+ ++ + F++W P +V ++ + P V ++ + ML++ T+I +++
Sbjct: 340 QRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGL-----MLASHTSIRHLFSKCL 394
Query: 276 HKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 154
++D + K+AF+ Y M + EF E+R+ + +L +Y+
Sbjct: 395 SQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 284 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 177
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 460 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHL 552
GRV I Y D + + H H L TG+ HH+
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHV 90
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 379 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 483
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At2g46530.2 68415.m05803 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 514
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -1
Query: 702 WTSPSXDXXVXTPVSTSHWSRTRQS----SLPRRPTMNSFPSPRSQTHASSPPXQMVKCD 535
W TP T S++++S + P +SF S SQ+H S+P +++ D
Sbjct: 260 WEIEPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFLSSFSQSHESNPSVKLLFQD 319
Query: 534 P 532
P
Sbjct: 320 P 320
>At2g46530.1 68415.m05802 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 601
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -1
Query: 702 WTSPSXDXXVXTPVSTSHWSRTRQS----SLPRRPTMNSFPSPRSQTHASSPPXQMVKCD 535
W TP T S++++S + P +SF S SQ+H S+P +++ D
Sbjct: 347 WEIEPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFLSSFSQSHESNPSVKLLFQD 406
Query: 534 P 532
P
Sbjct: 407 P 407
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -2
Query: 749 FLLDHXFFEIRRRXECGPHRVQ-XXXXXPPYPLPTGHVRASHLCREG 612
F L RRR GP RV+ PP P+ + V + L REG
Sbjct: 95 FCLQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 156 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 272
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 495 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 352
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 421 DELDSTLGFDGSDGRVHILGYDVTTVQ 501
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 69 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 230
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 231 TSA 239
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 263 SCTPSVLSCTGTSVRVWRRESSPK 192
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,252,746
Number of Sequences: 28952
Number of extensions: 360381
Number of successful extensions: 1403
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1999652000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -