Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_J15
(809 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ470474-1|ABF00125.1| 747|Homo sapiens scaffold attachment fac... 111 4e-24
BC027713-1|AAH27713.1| 804|Homo sapiens heterogeneous nuclear r... 108 3e-23
BC014232-1|AAH14232.1| 756|Homo sapiens HNRPUL1 protein protein. 108 3e-23
BC009988-1|AAH09988.2| 756|Homo sapiens HNRPUL1 protein protein. 108 3e-23
BC002564-1|AAH02564.1| 856|Homo sapiens heterogeneous nuclear r... 108 3e-23
AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated pr... 108 3e-23
X65488-1|CAA46472.1| 806|Homo sapiens hnRNP U protein protein. 101 4e-21
BX323046-7|CAI11058.1| 806|Homo sapiens heterogeneous nuclear r... 101 4e-21
BX323046-6|CAI11057.1| 723|Homo sapiens heterogeneous nuclear r... 101 4e-21
BX323046-5|CAI11056.1| 242|Homo sapiens heterogeneous nuclear r... 101 4e-21
BX323046-4|CAI11055.1| 549|Homo sapiens heterogeneous nuclear r... 101 4e-21
BC034925-1|AAH34925.1| 520|Homo sapiens Similar to heterogeneou... 101 4e-21
BC024767-1|AAH24767.1| 806|Homo sapiens heterogeneous nuclear r... 101 4e-21
BC015782-1|AAH15782.1| 722|Homo sapiens HNRPU protein protein. 101 4e-21
BC007950-1|AAH07950.2| 705|Homo sapiens HNRPU protein protein. 101 4e-21
BC003621-1|AAH03621.1| 806|Homo sapiens heterogeneous nuclear r... 101 4e-21
BC003367-1|AAH03367.1| 806|Homo sapiens heterogeneous nuclear r... 101 4e-21
AF068846-1|AAC19382.1| 824|Homo sapiens scaffold attachment fac... 101 4e-21
X70649-1|CAA49992.1| 740|Homo sapiens member of DEAD box protei... 82 2e-15
EF418571-1|ABN70941.1| 740|Homo sapiens DEAD box polypeptide 1 ... 82 2e-15
EF418570-1|ABN70940.1| 740|Homo sapiens DEAD box polypeptide 1 ... 82 2e-15
BC053673-1|AAH53673.1| 740|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 82 2e-15
BC012132-1|AAH12132.1| 740|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 82 2e-15
AK127057-1|BAC86806.1| 752|Homo sapiens protein ( Homo sapiens ... 49 2e-05
BC130632-1|AAI30633.1| 1314|Homo sapiens ring finger protein 123... 39 0.019
AY744152-1|AAU93470.1| 1314|Homo sapiens ubiquitin ligase protein. 39 0.019
X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2 prot... 35 0.30
AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2 (c... 35 0.30
AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2 (c... 35 0.30
AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2 (c... 35 0.30
AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2 (c... 35 0.30
AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2 (c... 35 0.30
AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2 (c... 35 0.30
AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2 (c... 35 0.30
AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2 pr... 35 0.30
BC041897-1|AAH41897.1| 227|Homo sapiens SPSB3 protein protein. 33 1.6
BC024244-1|AAH24244.1| 355|Homo sapiens splA/ryanodine receptor... 33 1.6
BC007588-1|AAH07588.2| 355|Homo sapiens splA/ryanodine receptor... 33 1.6
AF403028-1|AAL57347.1| 355|Homo sapiens SPRY domain-containing ... 33 1.6
AE006639-7|AAK61293.1| 191|Homo sapiens JFP13 protein. 33 1.6
BC047441-1|AAH47441.2| 355|Homo sapiens splA/ryanodine receptor... 32 2.8
Z93020-1|CAI21594.1| 729|Homo sapiens RAN binding protein 9 pro... 31 3.7
BC052781-1|AAH52781.1| 802|Homo sapiens RANBP9 protein protein. 31 3.7
BC019886-1|AAH19886.1| 486|Homo sapiens Unknown (protein for IM... 31 3.7
AL441883-5|CAI19841.1| 729|Homo sapiens RAN binding protein 9 p... 31 3.7
AF306510-1|AAK15469.1| 500|Homo sapiens RANBPM protein. 31 3.7
AF064606-1|AAC17111.1| 243|Homo sapiens KB07 protein protein. 31 3.7
AB055311-1|BAB62525.1| 729|Homo sapiens RanBPM protein. 31 3.7
AB008515-1|BAA23216.1| 500|Homo sapiens RanBPM protein. 31 3.7
BC121177-1|AAI21178.1| 620|Homo sapiens RAN binding protein 10 ... 31 4.9
BC121176-1|AAI21177.1| 620|Homo sapiens RAN binding protein 10 ... 31 4.9
BC099917-1|AAH99917.1| 620|Homo sapiens RAN binding protein 10 ... 31 4.9
AY337313-1|AAR01220.1| 620|Homo sapiens Ran-binding protein 10 ... 31 4.9
AB040897-1|BAA95988.1| 621|Homo sapiens KIAA1464 protein protein. 31 4.9
>DQ470474-1|ABF00125.1| 747|Homo sapiens scaffold attachment factor
A2 protein.
Length = 747
Score = 111 bits (266), Expect = 4e-24
Identities = 55/151 (36%), Positives = 82/151 (54%)
Frame = -2
Query: 697 PLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTDDSS 518
PL F W+GAR+T+ + E + +L +R+GWS D S
Sbjct: 268 PLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMKEGCTEVSL---LRVGWSVDFSR 324
Query: 517 LHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLG 338
LGE EFS+GF+ G NG+++E+G++ E DV+G + + E+E +S++ NG LG
Sbjct: 325 PQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVIGCFANFETEEVELSFSKNGEDLG 384
Query: 337 TAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
AF + +L DR L PHVL KN ++NFG
Sbjct: 385 VAFWISKDSLADRALLPHVLCKNCVVELNFG 415
>BC027713-1|AAH27713.1| 804|Homo sapiens heterogeneous nuclear
ribonucleoprotein U-like 1 protein.
Length = 804
Score = 108 bits (259), Expect = 3e-23
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Frame = -2
Query: 697 PLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTDDSS 518
PL+ F++ W+GARA++ + ++ + +RIGWS D S
Sbjct: 233 PLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCS 292
Query: 517 LHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLE-SEPCVVSYTLNGAPL 341
LGE FS+G+ TG+ N ++ YG E DV+G + D E +S+T NG +
Sbjct: 293 TQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWM 352
Query: 340 GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
G AF + ALG + LYPHVL KN + NFG
Sbjct: 353 GIAFRIQKEALGGQALYPHVLVKNCAVEFNFG 384
>BC014232-1|AAH14232.1| 756|Homo sapiens HNRPUL1 protein protein.
Length = 756
Score = 108 bits (259), Expect = 3e-23
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Frame = -2
Query: 697 PLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTDDSS 518
PL+ F++ W+GARA++ + ++ + +RIGWS D S
Sbjct: 133 PLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCS 192
Query: 517 LHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLE-SEPCVVSYTLNGAPL 341
LGE FS+G+ TG+ N ++ YG E DV+G + D E +S+T NG +
Sbjct: 193 TQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWM 252
Query: 340 GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
G AF + ALG + LYPHVL KN + NFG
Sbjct: 253 GIAFRIQKEALGGQALYPHVLVKNCAVEFNFG 284
>BC009988-1|AAH09988.2| 756|Homo sapiens HNRPUL1 protein protein.
Length = 756
Score = 108 bits (259), Expect = 3e-23
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Frame = -2
Query: 697 PLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTDDSS 518
PL+ F++ W+GARA++ + ++ + +RIGWS D S
Sbjct: 133 PLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCS 192
Query: 517 LHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLE-SEPCVVSYTLNGAPL 341
LGE FS+G+ TG+ N ++ YG E DV+G + D E +S+T NG +
Sbjct: 193 TQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWM 252
Query: 340 GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
G AF + ALG + LYPHVL KN + NFG
Sbjct: 253 GIAFRIQKEALGGQALYPHVLVKNCAVEFNFG 284
>BC002564-1|AAH02564.1| 856|Homo sapiens heterogeneous nuclear
ribonucleoprotein U-like 1 protein.
Length = 856
Score = 108 bits (259), Expect = 3e-23
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Frame = -2
Query: 697 PLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTDDSS 518
PL+ F++ W+GARA++ + ++ + +RIGWS D S
Sbjct: 233 PLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCS 292
Query: 517 LHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLE-SEPCVVSYTLNGAPL 341
LGE FS+G+ TG+ N ++ YG E DV+G + D E +S+T NG +
Sbjct: 293 TQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWM 352
Query: 340 GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
G AF + ALG + LYPHVL KN + NFG
Sbjct: 353 GIAFRIQKEALGGQALYPHVLVKNCAVEFNFG 384
>AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated
protein protein.
Length = 856
Score = 108 bits (259), Expect = 3e-23
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Frame = -2
Query: 697 PLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTDDSS 518
PL+ F++ W+GARA++ + ++ + +RIGWS D S
Sbjct: 233 PLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCS 292
Query: 517 LHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLE-SEPCVVSYTLNGAPL 341
LGE FS+G+ TG+ N ++ YG E DV+G + D E +S+T NG +
Sbjct: 293 TQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWM 352
Query: 340 GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
G AF + ALG + LYPHVL KN + NFG
Sbjct: 353 GIAFRIQKEALGGQALYPHVLVKNCAVEFNFG 384
>X65488-1|CAA46472.1| 806|Homo sapiens hnRNP U protein protein.
Length = 806
Score = 101 bits (241), Expect = 4e-21
Identities = 52/154 (33%), Positives = 76/154 (49%)
Frame = -2
Query: 706 SVVPLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTD 527
S L+ +F+ WAG RA++ + + KD +RIGWS
Sbjct: 288 SASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLT 347
Query: 526 DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGA 347
S + LGE EFS+G+ G N E ++YG+ +E DV+ + + ES+ +SY NG
Sbjct: 348 TSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQ 407
Query: 346 PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
LG AF+ + L R L+PHVL N + NFG
Sbjct: 408 DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFG 441
>BX323046-7|CAI11058.1| 806|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 806
Score = 101 bits (241), Expect = 4e-21
Identities = 52/154 (33%), Positives = 76/154 (49%)
Frame = -2
Query: 706 SVVPLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTD 527
S L+ +F+ WAG RA++ + + KD +RIGWS
Sbjct: 288 SASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLT 347
Query: 526 DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGA 347
S + LGE EFS+G+ G N E ++YG+ +E DV+ + + ES+ +SY NG
Sbjct: 348 TSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQ 407
Query: 346 PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
LG AF+ + L R L+PHVL N + NFG
Sbjct: 408 DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFG 441
>BX323046-6|CAI11057.1| 723|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 723
Score = 101 bits (241), Expect = 4e-21
Identities = 52/154 (33%), Positives = 76/154 (49%)
Frame = -2
Query: 706 SVVPLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTD 527
S L+ +F+ WAG RA++ + + KD +RIGWS
Sbjct: 205 SASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLT 264
Query: 526 DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGA 347
S + LGE EFS+G+ G N E ++YG+ +E DV+ + + ES+ +SY NG
Sbjct: 265 TSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQ 324
Query: 346 PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
LG AF+ + L R L+PHVL N + NFG
Sbjct: 325 DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFG 358
>BX323046-5|CAI11056.1| 242|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 242
Score = 101 bits (241), Expect = 4e-21
Identities = 52/154 (33%), Positives = 76/154 (49%)
Frame = -2
Query: 706 SVVPLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTD 527
S L+ +F+ WAG RA++ + + KD +RIGWS
Sbjct: 84 SASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLT 143
Query: 526 DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGA 347
S + LGE EFS+G+ G N E ++YG+ +E DV+ + + ES+ +SY NG
Sbjct: 144 TSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQ 203
Query: 346 PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
LG AF+ + L R L+PHVL N + NFG
Sbjct: 204 DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFG 237
>BX323046-4|CAI11055.1| 549|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 549
Score = 101 bits (241), Expect = 4e-21
Identities = 52/154 (33%), Positives = 76/154 (49%)
Frame = -2
Query: 706 SVVPLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTD 527
S L+ +F+ WAG RA++ + + KD +RIGWS
Sbjct: 31 SASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLT 90
Query: 526 DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGA 347
S + LGE EFS+G+ G N E ++YG+ +E DV+ + + ES+ +SY NG
Sbjct: 91 TSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQ 150
Query: 346 PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
LG AF+ + L R L+PHVL N + NFG
Sbjct: 151 DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFG 184
>BC034925-1|AAH34925.1| 520|Homo sapiens Similar to heterogeneous
nuclear ribonucleoprotein U (scaffold attachment facto
protein.
Length = 520
Score = 101 bits (241), Expect = 4e-21
Identities = 52/154 (33%), Positives = 76/154 (49%)
Frame = -2
Query: 706 SVVPLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTD 527
S L+ +F+ WAG RA++ + + KD +RIGWS
Sbjct: 2 SASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLT 61
Query: 526 DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGA 347
S + LGE EFS+G+ G N E ++YG+ +E DV+ + + ES+ +SY NG
Sbjct: 62 TSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQ 121
Query: 346 PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
LG AF+ + L R L+PHVL N + NFG
Sbjct: 122 DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFG 155
>BC024767-1|AAH24767.1| 806|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 806
Score = 101 bits (241), Expect = 4e-21
Identities = 52/154 (33%), Positives = 76/154 (49%)
Frame = -2
Query: 706 SVVPLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTD 527
S L+ +F+ WAG RA++ + + KD +RIGWS
Sbjct: 288 SASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLT 347
Query: 526 DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGA 347
S + LGE EFS+G+ G N E ++YG+ +E DV+ + + ES+ +SY NG
Sbjct: 348 TSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQ 407
Query: 346 PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
LG AF+ + L R L+PHVL N + NFG
Sbjct: 408 DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFG 441
>BC015782-1|AAH15782.1| 722|Homo sapiens HNRPU protein protein.
Length = 722
Score = 101 bits (241), Expect = 4e-21
Identities = 52/154 (33%), Positives = 76/154 (49%)
Frame = -2
Query: 706 SVVPLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTD 527
S L+ +F+ WAG RA++ + + KD +RIGWS
Sbjct: 204 SASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLT 263
Query: 526 DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGA 347
S + LGE EFS+G+ G N E ++YG+ +E DV+ + + ES+ +SY NG
Sbjct: 264 TSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQ 323
Query: 346 PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
LG AF+ + L R L+PHVL N + NFG
Sbjct: 324 DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFG 357
>BC007950-1|AAH07950.2| 705|Homo sapiens HNRPU protein protein.
Length = 705
Score = 101 bits (241), Expect = 4e-21
Identities = 52/154 (33%), Positives = 76/154 (49%)
Frame = -2
Query: 706 SVVPLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTD 527
S L+ +F+ WAG RA++ + + KD +RIGWS
Sbjct: 187 SASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLT 246
Query: 526 DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGA 347
S + LGE EFS+G+ G N E ++YG+ +E DV+ + + ES+ +SY NG
Sbjct: 247 TSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQ 306
Query: 346 PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
LG AF+ + L R L+PHVL N + NFG
Sbjct: 307 DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFG 340
>BC003621-1|AAH03621.1| 806|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 806
Score = 101 bits (241), Expect = 4e-21
Identities = 52/154 (33%), Positives = 76/154 (49%)
Frame = -2
Query: 706 SVVPLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTD 527
S L+ +F+ WAG RA++ + + KD +RIGWS
Sbjct: 288 SASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLT 347
Query: 526 DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGA 347
S + LGE EFS+G+ G N E ++YG+ +E DV+ + + ES+ +SY NG
Sbjct: 348 TSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQ 407
Query: 346 PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
LG AF+ + L R L+PHVL N + NFG
Sbjct: 408 DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFG 441
>BC003367-1|AAH03367.1| 806|Homo sapiens heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)
protein.
Length = 806
Score = 101 bits (241), Expect = 4e-21
Identities = 52/154 (33%), Positives = 76/154 (49%)
Frame = -2
Query: 706 SVVPLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTD 527
S L+ +F+ WAG RA++ + + KD +RIGWS
Sbjct: 288 SASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLT 347
Query: 526 DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGA 347
S + LGE EFS+G+ G N E ++YG+ +E DV+ + + ES+ +SY NG
Sbjct: 348 TSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQ 407
Query: 346 PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
LG AF+ + L R L+PHVL N + NFG
Sbjct: 408 DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFG 441
>AF068846-1|AAC19382.1| 824|Homo sapiens scaffold attachment factor
A protein.
Length = 824
Score = 101 bits (241), Expect = 4e-21
Identities = 52/154 (33%), Positives = 76/154 (49%)
Frame = -2
Query: 706 SVVPLSEGAFSHAWAGARATHXXXXXXXXXXXXXGDVMATTETSEKDALTSGIRIGWSTD 527
S L+ +F+ WAG RA++ + + KD +RIGWS
Sbjct: 306 SASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLT 365
Query: 526 DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGA 347
S + LGE EFS+G+ G N E ++YG+ +E DV+ + + ES+ +SY NG
Sbjct: 366 TSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQ 425
Query: 346 PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
LG AF+ + L R L+PHVL N + NFG
Sbjct: 426 DLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFG 459
>X70649-1|CAA49992.1| 740|Homo sapiens member of DEAD box protein
family protein.
Length = 740
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/114 (36%), Positives = 62/114 (54%)
Frame = -2
Query: 547 RIGWSTDDSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVV 368
R+GWST +SL LG +F +GF TG+ +N ++ YG+ D +G YLD++ V
Sbjct: 146 RVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH--V 203
Query: 367 SYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYERYNMLSKTKIV 206
++ NG LG AFE P + ++ L+P + KN K NFG E + K V
Sbjct: 204 KFSKNGKDLGLAFEIP-PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256
>EF418571-1|ABN70941.1| 740|Homo sapiens DEAD box polypeptide 1
protein.
Length = 740
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/114 (36%), Positives = 62/114 (54%)
Frame = -2
Query: 547 RIGWSTDDSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVV 368
R+GWST +SL LG +F +GF TG+ +N ++ YG+ D +G YLD++ V
Sbjct: 146 RVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH--V 203
Query: 367 SYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYERYNMLSKTKIV 206
++ NG LG AFE P + ++ L+P + KN K NFG E + K V
Sbjct: 204 KFSKNGKDLGLAFEIP-PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256
>EF418570-1|ABN70940.1| 740|Homo sapiens DEAD box polypeptide 1
protein.
Length = 740
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/114 (36%), Positives = 62/114 (54%)
Frame = -2
Query: 547 RIGWSTDDSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVV 368
R+GWST +SL LG +F +GF TG+ +N ++ YG+ D +G YLD++ V
Sbjct: 146 RVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH--V 203
Query: 367 SYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYERYNMLSKTKIV 206
++ NG LG AFE P + ++ L+P + KN K NFG E + K V
Sbjct: 204 KFSKNGKDLGLAFEIP-PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256
>BC053673-1|AAH53673.1| 740|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 1 protein.
Length = 740
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/114 (36%), Positives = 62/114 (54%)
Frame = -2
Query: 547 RIGWSTDDSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVV 368
R+GWST +SL LG +F +GF TG+ +N ++ YG+ D +G YLD++ V
Sbjct: 146 RVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH--V 203
Query: 367 SYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYERYNMLSKTKIV 206
++ NG LG AFE P + ++ L+P + KN K NFG E + K V
Sbjct: 204 KFSKNGKDLGLAFEIP-PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256
>BC012132-1|AAH12132.1| 740|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 1 protein.
Length = 740
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/114 (36%), Positives = 62/114 (54%)
Frame = -2
Query: 547 RIGWSTDDSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVV 368
R+GWST +SL LG +F +GF TG+ +N ++ YG+ D +G YLD++ V
Sbjct: 146 RVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH--V 203
Query: 367 SYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYERYNMLSKTKIV 206
++ NG LG AFE P + ++ L+P + KN K NFG E + K V
Sbjct: 204 KFSKNGKDLGLAFEIP-PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256
>AK127057-1|BAC86806.1| 752|Homo sapiens protein ( Homo sapiens
cDNA FLJ45114 fis, clone BRAWH3034775, highly similar
to Homo sapiens E1B-55kDa-associated protein 5
(E1B-AP5). ).
Length = 752
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = -2
Query: 370 VSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
+S+T NG +G AF + ALG + LYPHVL KN + NFG
Sbjct: 229 LSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFG 270
>BC130632-1|AAI30633.1| 1314|Homo sapiens ring finger protein 123
protein.
Length = 1314
Score = 39.1 bits (87), Expect = 0.019
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = -2
Query: 550 IRIGWSTDDSSLH----LGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLES 383
++IGW T + +G++ S+ ++ N YGK+ D+V +DL+
Sbjct: 147 MQIGWCTISCRFNQEEGVGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD 206
Query: 382 EPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHV-LTKNMCYKVNFG 245
+S+ LNG LGTAFE LG +P + L+ NFG
Sbjct: 207 G--TLSFCLNGVSLGTAFENLSRGLG-MAYFPAISLSFKESVAFNFG 250
>AY744152-1|AAU93470.1| 1314|Homo sapiens ubiquitin ligase protein.
Length = 1314
Score = 39.1 bits (87), Expect = 0.019
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = -2
Query: 550 IRIGWSTDDSSLH----LGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLES 383
++IGW T + +G++ S+ ++ N YGK+ D+V +DL+
Sbjct: 147 MQIGWCTISCRFNQEEGVGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDD 206
Query: 382 EPCVVSYTLNGAPLGTAFEFPRSALGDRTLYPHV-LTKNMCYKVNFG 245
+S+ LNG LGTAFE LG +P + L+ NFG
Sbjct: 207 G--TLSFCLNGVSLGTAFENLSRGLG-MAYFPAISLSFKESVAFNFG 250
>X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2 protein.
Length = 4967
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = -2
Query: 574 EKDALTSG-IRIGWSTD--DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVG 404
E + +T+G +R+GWS LG E ++ F+ + + YG+S DVVG
Sbjct: 1104 EFETVTAGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWHQGNEHYGRSWQAGDVVG 1163
Query: 403 AYLDLESEPCVVSYTLNGAPL----GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
+D+ + +TLNG L G+ F +GD + L ++NFG
Sbjct: 1164 CMVDMNEH--TMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSLGVAQVGRMNFG 1218
>AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = -2
Query: 574 EKDALTSG-IRIGWSTD--DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVG 404
E + +T+G +R+GWS LG E ++ F+ + + YG+S DVVG
Sbjct: 1102 EFETVTAGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWHQGNEHYGRSWQAGDVVG 1161
Query: 403 AYLDLESEPCVVSYTLNGAPL----GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
+D+ + +TLNG L G+ F +GD + L ++NFG
Sbjct: 1162 CMVDMNEH--TMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSLGVAQVGRMNFG 1216
>AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = -2
Query: 574 EKDALTSG-IRIGWSTD--DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVG 404
E + +T+G +R+GWS LG E ++ F+ + + YG+S DVVG
Sbjct: 1102 EFETVTAGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWHQGNEHYGRSWQAGDVVG 1161
Query: 403 AYLDLESEPCVVSYTLNGAPL----GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
+D+ + +TLNG L G+ F +GD + L ++NFG
Sbjct: 1162 CMVDMNEH--TMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSLGVAQVGRMNFG 1216
>AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = -2
Query: 574 EKDALTSG-IRIGWSTD--DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVG 404
E + +T+G +R+GWS LG E ++ F+ + + YG+S DVVG
Sbjct: 1102 EFETVTAGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWHQGNEHYGRSWQAGDVVG 1161
Query: 403 AYLDLESEPCVVSYTLNGAPL----GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
+D+ + +TLNG L G+ F +GD + L ++NFG
Sbjct: 1162 CMVDMNEH--TMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSLGVAQVGRMNFG 1216
>AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = -2
Query: 574 EKDALTSG-IRIGWSTD--DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVG 404
E + +T+G +R+GWS LG E ++ F+ + + YG+S DVVG
Sbjct: 1102 EFETVTAGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWHQGNEHYGRSWQAGDVVG 1161
Query: 403 AYLDLESEPCVVSYTLNGAPL----GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
+D+ + +TLNG L G+ F +GD + L ++NFG
Sbjct: 1162 CMVDMNEH--TMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSLGVAQVGRMNFG 1216
>AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = -2
Query: 574 EKDALTSG-IRIGWSTD--DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVG 404
E + +T+G +R+GWS LG E ++ F+ + + YG+S DVVG
Sbjct: 1102 EFETVTAGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWHQGNEHYGRSWQAGDVVG 1161
Query: 403 AYLDLESEPCVVSYTLNGAPL----GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
+D+ + +TLNG L G+ F +GD + L ++NFG
Sbjct: 1162 CMVDMNEH--TMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSLGVAQVGRMNFG 1216
>AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = -2
Query: 574 EKDALTSG-IRIGWSTD--DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVG 404
E + +T+G +R+GWS LG E ++ F+ + + YG+S DVVG
Sbjct: 1102 EFETVTAGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWHQGNEHYGRSWQAGDVVG 1161
Query: 403 AYLDLESEPCVVSYTLNGAPL----GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
+D+ + +TLNG L G+ F +GD + L ++NFG
Sbjct: 1162 CMVDMNEH--TMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSLGVAQVGRMNFG 1216
>AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = -2
Query: 574 EKDALTSG-IRIGWSTD--DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVG 404
E + +T+G +R+GWS LG E ++ F+ + + YG+S DVVG
Sbjct: 1102 EFETVTAGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWHQGNEHYGRSWQAGDVVG 1161
Query: 403 AYLDLESEPCVVSYTLNGAPL----GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
+D+ + +TLNG L G+ F +GD + L ++NFG
Sbjct: 1162 CMVDMNEH--TMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSLGVAQVGRMNFG 1216
>AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2
protein.
Length = 4967
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = -2
Query: 574 EKDALTSG-IRIGWSTD--DSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVG 404
E + +T+G +R+GWS LG E ++ F+ + + YG+S DVVG
Sbjct: 1104 EFETVTAGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWHQGNEHYGRSWQAGDVVG 1163
Query: 403 AYLDLESEPCVVSYTLNGAPL----GTAFEFPRSALGDRTLYPHVLTKNMCYKVNFG 245
+D+ + +TLNG L G+ F +GD + L ++NFG
Sbjct: 1164 CMVDMNEH--TMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSLGVAQVGRMNFG 1218
>BC041897-1|AAH41897.1| 227|Homo sapiens SPSB3 protein protein.
Length = 227
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 511 LGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLD 392
LG E SWG TG + + G+ + + ++G +LD
Sbjct: 58 LGRDEDSWGLSYTGLLHHKGDKTSFSSRFGQGSIIGVHLD 97
>BC024244-1|AAH24244.1| 355|Homo sapiens splA/ryanodine receptor
domain and SOCS box containing 3 protein.
Length = 355
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 511 LGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLD 392
LG E SWG TG + + G+ + + ++G +LD
Sbjct: 186 LGRDEDSWGLSYTGLLHHKGDKTSFSSRFGQGSIIGVHLD 225
>BC007588-1|AAH07588.2| 355|Homo sapiens splA/ryanodine receptor
domain and SOCS box containing 3 protein.
Length = 355
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 511 LGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLD 392
LG E SWG TG + + G+ + + ++G +LD
Sbjct: 186 LGRDEDSWGLSYTGLLHHKGDKTSFSSRFGQGSIIGVHLD 225
>AF403028-1|AAL57347.1| 355|Homo sapiens SPRY domain-containing
SOCS box protein SSB-3 protein.
Length = 355
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 511 LGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLD 392
LG E SWG TG + + G+ + + ++G +LD
Sbjct: 186 LGRDEDSWGLSYTGLLHHKGDKTSFSSRFGQGSIIGVHLD 225
>AE006639-7|AAK61293.1| 191|Homo sapiens JFP13 protein.
Length = 191
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 511 LGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLD 392
LG E SWG TG + + G+ + + ++G +LD
Sbjct: 22 LGRDEDSWGLSYTGLLHHKGDKTSFSSRFGQGSIIGVHLD 61
>BC047441-1|AAH47441.2| 355|Homo sapiens splA/ryanodine receptor
domain and SOCS box containing 3 protein.
Length = 355
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 511 LGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLD 392
LG E SWG TG + + G+ + + ++G +LD
Sbjct: 186 LGRDEDSWGLSYTGLLHHKGDKTSFPSRFGQGSIIGVHLD 225
>Z93020-1|CAI21594.1| 729|Homo sapiens RAN binding protein 9
protein.
Length = 729
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 246 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCF--YTKNGHSLGI 303
Query: 334 AF 329
AF
Sbjct: 304 AF 305
>BC052781-1|AAH52781.1| 802|Homo sapiens RANBP9 protein protein.
Length = 802
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 319 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCF--YTKNGHSLGI 376
Query: 334 AF 329
AF
Sbjct: 377 AF 378
>BC019886-1|AAH19886.1| 486|Homo sapiens Unknown (protein for
IMAGE:4419330) protein.
Length = 486
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 83 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCF--YTKNGHSLGI 140
Query: 334 AF 329
AF
Sbjct: 141 AF 142
>AL441883-5|CAI19841.1| 729|Homo sapiens RAN binding protein 9
protein.
Length = 729
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 246 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCF--YTKNGHSLGI 303
Query: 334 AF 329
AF
Sbjct: 304 AF 305
>AF306510-1|AAK15469.1| 500|Homo sapiens RANBPM protein.
Length = 500
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 17 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCF--YTKNGHSLGI 74
Query: 334 AF 329
AF
Sbjct: 75 AF 76
>AF064606-1|AAC17111.1| 243|Homo sapiens KB07 protein protein.
Length = 243
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 97 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCF--YTKNGHSLGI 154
Query: 334 AF 329
AF
Sbjct: 155 AF 156
>AB055311-1|BAB62525.1| 729|Homo sapiens RanBPM protein.
Length = 729
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 246 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCF--YTKNGHSLGI 303
Query: 334 AF 329
AF
Sbjct: 304 AF 305
>AB008515-1|BAA23216.1| 500|Homo sapiens RanBPM protein.
Length = 500
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 17 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCF--YTKNGHSLGI 74
Query: 334 AF 329
AF
Sbjct: 75 AF 76
>BC121177-1|AAI21178.1| 620|Homo sapiens RAN binding protein 10
protein.
Length = 620
Score = 31.1 bits (67), Expect = 4.9
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 134 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCF--YTKNGHSLGI 191
Query: 334 AF-EFPRSALGDRTLYPHV--LTKNMCYKVNFGYERY 233
AF + P + LYP V T NFG + +
Sbjct: 192 AFTDLPAN------LYPTVGLQTPGEIVDANFGQQPF 222
>BC121176-1|AAI21177.1| 620|Homo sapiens RAN binding protein 10
protein.
Length = 620
Score = 31.1 bits (67), Expect = 4.9
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 134 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCF--YTKNGHSLGI 191
Query: 334 AF-EFPRSALGDRTLYPHV--LTKNMCYKVNFGYERY 233
AF + P + LYP V T NFG + +
Sbjct: 192 AFTDLPAN------LYPTVGLQTPGEIVDANFGQQPF 222
>BC099917-1|AAH99917.1| 620|Homo sapiens RAN binding protein 10
protein.
Length = 620
Score = 31.1 bits (67), Expect = 4.9
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 134 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCF--YTKNGHSLGI 191
Query: 334 AF-EFPRSALGDRTLYPHV--LTKNMCYKVNFGYERY 233
AF + P + LYP V T NFG + +
Sbjct: 192 AFTDLPAN------LYPTVGLQTPGEIVDANFGQQPF 222
>AY337313-1|AAR01220.1| 620|Homo sapiens Ran-binding protein 10
protein.
Length = 620
Score = 31.1 bits (67), Expect = 4.9
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 134 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCF--YTKNGHSLGI 191
Query: 334 AF-EFPRSALGDRTLYPHV--LTKNMCYKVNFGYERY 233
AF + P + LYP V T NFG + +
Sbjct: 192 AFTDLPAN------LYPTVGLQTPGEIVDANFGQQPF 222
>AB040897-1|BAA95988.1| 621|Homo sapiens KIAA1464 protein protein.
Length = 621
Score = 31.1 bits (67), Expect = 4.9
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = -2
Query: 508 GESEFSWGFESTG--RIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGT 335
G + S+G+ ++G + YG + DV+G ++L + C YT NG LG
Sbjct: 135 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCF--YTKNGHSLGI 192
Query: 334 AF-EFPRSALGDRTLYPHV--LTKNMCYKVNFGYERY 233
AF + P + LYP V T NFG + +
Sbjct: 193 AFTDLPAN------LYPTVGLQTPGEIVDANFGQQPF 223
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,946,579
Number of Sequences: 237096
Number of extensions: 1605173
Number of successful extensions: 4483
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 4195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4461
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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