Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J14
         (796 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006389-1|AAH06389.1|  323|Homo sapiens poly (ADP-ribose) polym...    33   1.6  
AB041940-1|BAD83594.1|  307|Homo sapiens G-protein coupled recep...    31   3.6  
BC031074-1|AAH31074.1|  322|Homo sapiens poly (ADP-ribose) polym...    30   8.4  
AK000516-1|BAA91222.1|  207|Homo sapiens protein ( Homo sapiens ...    30   8.4  

>BC006389-1|AAH06389.1|  323|Homo sapiens poly (ADP-ribose)
           polymerase family, member 16 protein.
          Length = 323

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 21/48 (43%), Positives = 25/48 (52%)
 Frame = -3

Query: 236 LVNSHLPPRSAVSCHCIMAWPKSIRFIVAIHSYLLLVHSVSVIRKEVF 93
           LV S  PP+S  S    ++W  S  F V I  YLLL+  VSVI    F
Sbjct: 269 LVYSQKPPKSRASSQ--LSWFSSHWFTVMISLYLLLLLIVSVINSSAF 314


>AB041940-1|BAD83594.1|  307|Homo sapiens G-protein coupled receptor
           protein.
          Length = 307

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = -3

Query: 209 SAVSCHCIMAWPKSIRFIVAIHSYLLLVHSVSVIRKEVFCCYCYVMYKYS 60
           ++ +C+  + WP S+     I+S LLLV  + ++       +CY M++++
Sbjct: 2   NSTTCNSTLTWPASVNNFFIIYSALLLVLGL-LLNSVALWVFCYRMHQWT 50


>BC031074-1|AAH31074.1|  322|Homo sapiens poly (ADP-ribose)
           polymerase family, member 16 protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 21/48 (43%), Positives = 25/48 (52%)
 Frame = -3

Query: 236 LVNSHLPPRSAVSCHCIMAWPKSIRFIVAIHSYLLLVHSVSVIRKEVF 93
           LV S  PP+ A S    ++W  S  F V I  YLLL+  VSVI    F
Sbjct: 269 LVYSQKPPKRAPSQ---LSWFSSHWFTVMISLYLLLLLIVSVINSSAF 313


>AK000516-1|BAA91222.1|  207|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20509 fis, clone KAT09623. ).
          Length = 207

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 21/48 (43%), Positives = 25/48 (52%)
 Frame = -3

Query: 236 LVNSHLPPRSAVSCHCIMAWPKSIRFIVAIHSYLLLVHSVSVIRKEVF 93
           LV S  PP+ A S    ++W  S  F V I  YLLL+  VSVI    F
Sbjct: 154 LVYSQKPPKRASSQ---LSWFSSHWFTVMISLYLLLLLIVSVINSSAF 198


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,176,900
Number of Sequences: 237096
Number of extensions: 1442153
Number of successful extensions: 2781
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2780
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)