Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J10
         (785 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7PI90 Cluster: Chromosome chr13 scaffold_17, whole gen...    42   0.023
UniRef50_A2DTE8 Cluster: Clan CA, family C2, calpain-like cystei...    34   3.5  

>UniRef50_A7PI90 Cluster: Chromosome chr13 scaffold_17, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr13 scaffold_17, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 43

 Score = 41.5 bits (93), Expect = 0.023
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -3

Query: 561 FIYLSCWWNVVLLYFSLMYIVMSYVIYIC 475
           F++L+ WWN + L+F    I MSYV+Y+C
Sbjct: 3   FLHLTIWWNYINLHFDTKTIAMSYVLYLC 31


>UniRef50_A2DTE8 Cluster: Clan CA, family C2, calpain-like cysteine
           peptidase; n=1; Trichomonas vaginalis G3|Rep: Clan CA,
           family C2, calpain-like cysteine peptidase - Trichomonas
           vaginalis G3
          Length = 1437

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = -1

Query: 329 GSVTEALIALFIILNCHGHLRNIGINRFVYFTP**FICNVRSFCIEQETNCYFPLFITKS 150
           G V    I  F+ + C G+ + I I  ++ F    F+ ++ +   +++ N YF  FIT  
Sbjct: 520 GVVLLLTILYFVFIFCFGNTKFISIAVYLIFI---FLFSIYNLATQEDNNYYFKTFITLI 576

Query: 149 VVSFKKC 129
           V  F  C
Sbjct: 577 VFLFVSC 583


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,667,219
Number of Sequences: 1657284
Number of extensions: 12796237
Number of successful extensions: 24692
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24666
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)