Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J09
         (811 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1778 + 29451902-29452166,29452665-29452849,29453504-294536...    29   5.8  
04_04_0014 + 22158441-22158669,22158782-22158878,22159264-221594...    28   7.6  

>07_03_1778 +
           29451902-29452166,29452665-29452849,29453504-29453693,
           29453990-29454168,29454263-29454314,29454426-29454553,
           29454920-29455099,29455209-29455276,29455364-29455506,
           29455682-29455743,29455874-29455987,29456180-29456320,
           29456680-29456832,29456973-29457026,29457102-29457212,
           29457339-29457512,29457600-29457680,29457788-29457886,
           29457905-29458057
          Length = 843

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 312 CVVFRKRSWRAATKKKIENHWLTYIYYIRGH 220
           C + R   +++    ++++HW+   YY RGH
Sbjct: 743 CEIARNSVYQSGFSHRLKSHWIGRNYYKRGH 773


>04_04_0014 +
           22158441-22158669,22158782-22158878,22159264-22159461,
           22159907-22160141,22160383-22160710,22160798-22161068,
           22161169-22161424,22161508-22161964,22162096-22162286
          Length = 753

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/57 (28%), Positives = 32/57 (56%)
 Frame = -2

Query: 471 GLLLFVLNLFYTKM*VFYLSIEALRSLPGQLVLSYIDAVYLEIVNKF*DLSFFCVVF 301
           G++LF++ + Y+ M  + +   +L S  GQ+ L+Y + +   I  +F  +  FC+ F
Sbjct: 141 GIVLFIVYVVYS-MTYYAVESVSLISKFGQISLTYSELLLYIIGLRFGSIGLFCMAF 196


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,339,172
Number of Sequences: 37544
Number of extensions: 344165
Number of successful extensions: 591
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)