Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J09
         (811 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase prot...    32   0.42 
Z74476-6|CAA98967.1| 1139|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z74473-6|CAA98951.1| 1139|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U20168-1|AAA66364.1| 1139|Caenorhabditis elegans Lin-25 protein ...    30   1.7  
Z49068-8|CAA88861.1|  540|Caenorhabditis elegans Hypothetical pr...    28   6.9  
U25697-1|AAA92842.1|  540|Caenorhabditis elegans CCT-4 protein.        28   6.9  
Z81118-3|CAB03325.1|  346|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase protein
           4 protein.
          Length = 751

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -2

Query: 717 GAPPPHXXSPYHXVQGSSNLYTSNLYLY 634
           GA P    SP   + G SN YT NLY Y
Sbjct: 347 GASPMQPFSPMRNIDGLSNKYTDNLYSY 374


>Z74476-6|CAA98967.1| 1139|Caenorhabditis elegans Hypothetical protein
            F56H9.5 protein.
          Length = 1139

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = +3

Query: 342  LSLNILRRCMIVLADPADFVVPQSINKRPTFLYKINLKQTKVIRSTGDTSKEK 500
            LS+ ++ R M  +   A++ + + +N+ P F+ ++NLK+ K         +EK
Sbjct: 981  LSIRVVIRLMTQVLLIAEWTLDRLLNEDPAFVERLNLKEVKAPEPEDPDKREK 1033


>Z74473-6|CAA98951.1| 1139|Caenorhabditis elegans Hypothetical protein
            F56H9.5 protein.
          Length = 1139

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = +3

Query: 342  LSLNILRRCMIVLADPADFVVPQSINKRPTFLYKINLKQTKVIRSTGDTSKEK 500
            LS+ ++ R M  +   A++ + + +N+ P F+ ++NLK+ K         +EK
Sbjct: 981  LSIRVVIRLMTQVLLIAEWTLDRLLNEDPAFVERLNLKEVKAPEPEDPDKREK 1033


>U20168-1|AAA66364.1| 1139|Caenorhabditis elegans Lin-25 protein
            protein.
          Length = 1139

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = +3

Query: 342  LSLNILRRCMIVLADPADFVVPQSINKRPTFLYKINLKQTKVIRSTGDTSKEK 500
            LS+ ++ R M  +   A++ + + +N+ P F+ ++NLK+ K         +EK
Sbjct: 981  LSIRVVIRLMTQVLLIAEWTLDRLLNEDPAFVERLNLKEVKAPEPEDPDKREK 1033


>Z49068-8|CAA88861.1|  540|Caenorhabditis elegans Hypothetical
           protein K01C8.10 protein.
          Length = 540

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +3

Query: 327 LKTCSLSLNILRRCMIVLADPADFVVPQSINKRPTFLYKINLKQTKVIRSTGDTSKEKQ 503
           + T SL+  ++ +   +LA  A   V + IN        +NLK  K+I+  GDT +E +
Sbjct: 165 MATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDS--NVNLKMIKIIKKMGDTVEESE 221


>U25697-1|AAA92842.1|  540|Caenorhabditis elegans CCT-4 protein.
          Length = 540

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +3

Query: 327 LKTCSLSLNILRRCMIVLADPADFVVPQSINKRPTFLYKINLKQTKVIRSTGDTSKEKQ 503
           + T SL+  ++ +   +LA  A   V + IN        +NLK  K+I+  GDT +E +
Sbjct: 165 MATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDS--NVNLKMIKIIKKMGDTVEESE 221


>Z81118-3|CAB03325.1|  346|Caenorhabditis elegans Hypothetical
           protein T10G3.2 protein.
          Length = 346

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
 Frame = +1

Query: 148 SLL*PNVETGSNSSVIRIHI*IVCVTS--NIIYICKPV------ILNLLFC 276
           S L    +   N   +RIHI +VCV +   I+++C  +      +LNL +C
Sbjct: 201 SALSERYQVNENLKALRIHIPVVCVDTGIQIMFLCSDIFWNTAQVLNLNYC 251


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,567,285
Number of Sequences: 27780
Number of extensions: 339469
Number of successful extensions: 673
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)