Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J08
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.17 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.7  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   8.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 187 SSNAFRFEG*GSRCNYTETLELISQGGWRI 98
           + N+ ++ G      Y E +EL  +GGW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 264 IYKFAGLIIITRCYSFNVEADREQLLSTY 350
           ++KF  + +IT  Y+FN      +L   Y
Sbjct: 411 VWKFFNIFLITPFYNFNENTIHSKLCKLY 439


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 198  NRCGGGTHP 224
            NRCG G HP
Sbjct: 1747 NRCGEGRHP 1755



 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 198  NRCGGGTHP 224
            NRCG G HP
Sbjct: 2670 NRCGCGKHP 2678


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +1

Query: 94  RKCATHLEI*VLRSQYSYNGYLTLRTETHYCFT 192
           R   T  +I  L  ++ YN YLT R       T
Sbjct: 237 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHT 269


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +1

Query: 94  RKCATHLEI*VLRSQYSYNGYLTLRTETHYCFT 192
           R   T  +I  L  ++ YN YLT R       T
Sbjct: 237 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHT 269


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 181 NAFRFEG*GSRCNYTETLELISQGGW 104
           +A R+ G      Y E +E  + GGW
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 520 NRRKLVSFLRSEPGPGIQI 464
           N+R ++   R  PGP +++
Sbjct: 94  NKRSIIVVNRKMPGPSVEV 112


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 241 PLVSPHGWVPPP 206
           P V PH  VPPP
Sbjct: 12  PTVLPHQEVPPP 23


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +1

Query: 94  RKCATHLEI*VLRSQYSYNGYLTLRTETHYCFT 192
           R   T  +I  L  ++ YN YLT R       T
Sbjct: 237 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHT 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,684
Number of Sequences: 336
Number of extensions: 4508
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)