Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_J07
(759 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 287 4e-78
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 287 4e-78
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 287 4e-78
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 286 9e-78
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 286 9e-78
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 280 6e-76
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 186 1e-47
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 102 2e-22
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 100 9e-22
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 100 1e-21
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 100 1e-21
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 100 1e-21
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 100 1e-21
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 98 6e-21
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 98 6e-21
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 97 8e-21
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 52 5e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 49 4e-06
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.27
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.27
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.5
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 4.4
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 5.9
At1g68080.1 68414.m07777 expressed protein 28 5.9
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 5.9
At3g26855.1 68416.m03360 hypothetical protein 28 7.7
At1g23200.1 68414.m02898 pectinesterase family protein contains ... 28 7.7
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 287 bits (705), Expect = 4e-78
Identities = 125/144 (86%), Positives = 137/144 (95%)
Frame = -1
Query: 594 ALEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 415
A EPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 414 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 235
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 234 EGEFSEAREDLAALEKDYEEVGMD 163
EGEFSEAREDLAALEKDYEEVG +
Sbjct: 415 EGEFSEAREDLAALEKDYEEVGAE 438
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 287 bits (705), Expect = 4e-78
Identities = 125/144 (86%), Positives = 137/144 (95%)
Frame = -1
Query: 594 ALEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 415
A EPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 414 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 235
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 234 EGEFSEAREDLAALEKDYEEVGMD 163
EGEFSEAREDLAALEKDYEEVG +
Sbjct: 415 EGEFSEAREDLAALEKDYEEVGAE 438
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 287 bits (705), Expect = 4e-78
Identities = 125/144 (86%), Positives = 137/144 (95%)
Frame = -1
Query: 594 ALEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 415
A EPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 414 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 235
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 234 EGEFSEAREDLAALEKDYEEVGMD 163
EGEFSEAREDLAALEKDYEEVG +
Sbjct: 415 EGEFSEAREDLAALEKDYEEVGAE 438
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 286 bits (702), Expect = 9e-78
Identities = 124/142 (87%), Positives = 135/142 (95%)
Frame = -1
Query: 588 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 409
EPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GIN
Sbjct: 297 EPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGIN 356
Query: 408 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEG 229
YQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEG
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG 416
Query: 228 EFSEAREDLAALEKDYEEVGMD 163
EFSEAREDLAALEKDYEEVG +
Sbjct: 417 EFSEAREDLAALEKDYEEVGAE 438
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 286 bits (702), Expect = 9e-78
Identities = 124/142 (87%), Positives = 135/142 (95%)
Frame = -1
Query: 588 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 409
EPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GIN
Sbjct: 297 EPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGIN 356
Query: 408 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEG 229
YQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEG
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG 416
Query: 228 EFSEAREDLAALEKDYEEVGMD 163
EFSEAREDLAALEKDYEEVG +
Sbjct: 417 EFSEAREDLAALEKDYEEVGAE 438
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 280 bits (687), Expect = 6e-76
Identities = 121/140 (86%), Positives = 132/140 (94%)
Frame = -1
Query: 588 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 409
EP+N M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KRTIQFVDWCPTGFK GIN
Sbjct: 297 EPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGIN 356
Query: 408 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEG 229
YQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEG
Sbjct: 357 YQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEG 416
Query: 228 EFSEAREDLAALEKDYEEVG 169
EFSEAREDLAALEKDYEEVG
Sbjct: 417 EFSEAREDLAALEKDYEEVG 436
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 186 bits (453), Expect = 1e-47
Identities = 79/92 (85%), Positives = 87/92 (94%)
Frame = -1
Query: 594 ALEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 415
A EPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 414 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 319
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 102 bits (245), Expect = 2e-22
Identities = 46/135 (34%), Positives = 77/135 (57%)
Frame = -1
Query: 579 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 400
N M DPRHG+Y+ ++RG + K+V+ I ++ K + FV+W P K + P
Sbjct: 299 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIP 358
Query: 399 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 220
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 359 PT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 410
Query: 219 EAREDLAALEKDYEE 175
EA ++ L +Y++
Sbjct: 411 EAESNMNDLVSEYQQ 425
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 100 bits (240), Expect = 9e-22
Identities = 46/135 (34%), Positives = 76/135 (56%)
Frame = -1
Query: 579 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 400
N M DPRHG+Y+ ++RG + K+V+ I I+ K + FV+W P K + P
Sbjct: 299 NMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIP 358
Query: 399 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 220
P ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 359 PK--------GLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 410
Query: 219 EAREDLAALEKDYEE 175
EA ++ L +Y++
Sbjct: 411 EAESNMNDLVAEYQQ 425
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 100 bits (239), Expect = 1e-21
Identities = 45/135 (33%), Positives = 77/135 (57%)
Frame = -1
Query: 579 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 400
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 399 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 220
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 219 EAREDLAALEKDYEE 175
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 100 bits (239), Expect = 1e-21
Identities = 45/135 (33%), Positives = 77/135 (57%)
Frame = -1
Query: 579 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 400
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 399 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 220
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 219 EAREDLAALEKDYEE 175
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 100 bits (239), Expect = 1e-21
Identities = 45/135 (33%), Positives = 77/135 (57%)
Frame = -1
Query: 579 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 400
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 399 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 220
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 219 EAREDLAALEKDYEE 175
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 100 bits (239), Expect = 1e-21
Identities = 45/135 (33%), Positives = 77/135 (57%)
Frame = -1
Query: 579 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 400
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 399 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 220
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 219 EAREDLAALEKDYEE 175
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 97.9 bits (233), Expect = 6e-21
Identities = 45/135 (33%), Positives = 77/135 (57%)
Frame = -1
Query: 579 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 400
N M DPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 298 NMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVC--- 354
Query: 399 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 220
+ P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 355 -DIAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 219 EAREDLAALEKDYEE 175
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVAEYQQ 424
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 97.9 bits (233), Expect = 6e-21
Identities = 44/135 (32%), Positives = 76/135 (56%)
Frame = -1
Query: 579 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 400
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC--- 354
Query: 399 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 220
+ P G + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 355 -DIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 219 EAREDLAALEKDYEE 175
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 97.5 bits (232), Expect = 8e-21
Identities = 44/135 (32%), Positives = 77/135 (57%)
Frame = -1
Query: 579 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 400
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 298 NMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVC--- 354
Query: 399 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 220
+ P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 355 -DIAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 219 EAREDLAALEKDYEE 175
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVAEYQQ 424
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 51.6 bits (118), Expect = 5e-07
Identities = 31/127 (24%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Frame = -1
Query: 546 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 367
KY++ + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V ++
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSG 377
Query: 366 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLA 199
+ ML++ T+I ++R ++D + K+AF+ Y M + EF E+R+ +
Sbjct: 378 L-----MLASHTSIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIE 432
Query: 198 ALEKDYE 178
+L +Y+
Sbjct: 433 SLVDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/127 (22%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Frame = -1
Query: 546 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 367
KY++ + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V ++
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSG 377
Query: 366 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLA 199
+ ML++ T+I +++ ++D + K+AF+ Y M + EF E+R+ +
Sbjct: 378 L-----MLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIE 432
Query: 198 ALEKDYE 178
+L +Y+
Sbjct: 433 SLVDEYK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 308 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 201
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 484 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLQ 591
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 403 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 507
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 180 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 296
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 519 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 376
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 445 DELDSTLGFDGSDGRVHILGYDVTTVQ 525
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 93 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 254
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 255 TSA 263
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 287 SCTPSVLSCTGTSVRVWRRESSPK 216
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
>At1g23200.1 68414.m02898 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 554
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 498 PWVRRHHGTAYSKPCTCHDGGRISPSGWRAPKHAFVIS 611
PW R H T + K C+ G +SP+GW +F +S
Sbjct: 461 PW-RSHSRTVFMK---CNLGALVSPAGWLPWSGSFALS 494
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,640,759
Number of Sequences: 28952
Number of extensions: 300114
Number of successful extensions: 1078
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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