Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J06
         (842 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    81   1e-15
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    67   2e-11
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    40   0.002
U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical pr...    38   0.007
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    30   2.4  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    30   2.4  
AL032637-6|CAA21620.2|  422|Caenorhabditis elegans Hypothetical ...    29   3.1  
U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
 Frame = -3

Query: 561 YDIALLFLETPLDSAPNVGVACLP--PARERAPAGVRCFATGWGKDKFGKEGRYQVIMKK 388
           YD A++ +  P++++      CLP  PA E       C  TGWG    G       + ++
Sbjct: 144 YDFAIMRIHPPVNTSTTARPICLPSLPAVENR----LCVVTGWGSTIEGSSLSAPTL-RE 198

Query: 387 VDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGGEPDK-DTCRGDGGSPLVCPIDYEKN 211
           + VP++    C S      +GR      + +CAG    K D+C+GD G PL+C  D    
Sbjct: 199 IHVPLLSTLFCSSL--PNYIGRIHL--PSMLCAGYSYGKIDSCQGDSGGPLMCARD---G 251

Query: 210 RYVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWID 109
            +   G+V+WGIGC   G PGVY +V +  TWI+
Sbjct: 252 HWELTGVVSWGIGCARPGMPGVYGNVHSASTWIN 285


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
 Frame = -3

Query: 561 YDIALLFLETP-LDSAPNVGVACLPPARERAPAGVRCFATGWGKDKFGKEGRYQVIMKKV 385
           +DIA+L +  P ++        CLP        G +C  +GWG        RY   ++  
Sbjct: 116 HDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSMGL----RYAERLQAA 171

Query: 384 DVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGG-EPDKDTCRGDGGSPLVCPIDYEKNR 208
            +P+++R  C +  +      +  +  +  CAG  E   D+C+GD G P  C    E   
Sbjct: 172 LIPIINRFDCVNSSQI-----YSSMSRSAFCAGYLEGGIDSCQGDSGGPFACR--REDGA 224

Query: 207 YVQYGIVAWGIGCGEDGTPGVYVDVSNLRTWIDDKVAGK 91
           +V  G+++WG GC +   PG+Y  V+   +WI   + G+
Sbjct: 225 FVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISAIINGQ 263


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 36/131 (27%), Positives = 49/131 (37%), Gaps = 1/131 (0%)
 Frame = -3

Query: 558 DIALLFLETPLDSAPNVGVACLPPARE-RAPAGVRCFATGWGKDKFGKEGRYQVIMKKVD 382
           DI +L LE+ +D       ACLP   E    +G    + GWG D  GK G        + 
Sbjct: 177 DIVILELESTIDDVEGANYACLPFLPEVNIQSGANVTSFGWGSDP-GK-GFDNAAFPMIQ 234

Query: 381 VPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRYV 202
           V  +   T  +       G      S   C   E DK+ C GD G  L          ++
Sbjct: 235 VLTLATETLATC--EENWGTSIPFDS--FCTAEEEDKNVCSGDSGGGLTFHQSDSAREFI 290

Query: 201 QYGIVAWGIGC 169
              IV++G  C
Sbjct: 291 -IAIVSYGSDC 300


>U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical
           protein F48E3.4 protein.
          Length = 279

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -3

Query: 264 CRGDGGSPLVCPIDYEKNRYVQYGIVAWGIG---CGEDGTPGVYVDVSNLRT 118
           C  D G+PL C +D E N+YVQ GIV+   G     ED +  V V+ S ++T
Sbjct: 197 CWDDIGAPLECVLDVENNKYVQVGIVSGLYGREMDKEDNSTMVVVNCSEVQT 248


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 306 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 178
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 306 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 178
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 306 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 178
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 306 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 178
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>AL032637-6|CAA21620.2|  422|Caenorhabditis elegans Hypothetical
           protein Y43F8C.6 protein.
          Length = 422

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 416 SFPNLSFPQPVAKHLTPAGARSLAGGRHATPTFGAESNG 532
           S P+ S P P + + T AG  +L    HA P  GA   G
Sbjct: 268 SGPSSSAPGPSSSYSTGAGGGALLSTGHAVPIMGAGGTG 306


>U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical
           protein B0286.6 protein.
          Length = 279

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 564 FYDIALLFLETPLDSAPNVGVACLPPA 484
           F DIA+  LE P++ + ++  ACLP A
Sbjct: 120 FNDIAVFELEEPIEFSKDIFPACLPSA 146


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,128,310
Number of Sequences: 27780
Number of extensions: 285192
Number of successful extensions: 762
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)