Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_J05
(814 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26083| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.068
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.090
SB_31503| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8) 31 1.1
SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 31 1.5
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_26017| Best HMM Match : Extensin_2 (HMM E-Value=0.11) 30 2.6
SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059) 29 3.4
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 29 3.4
SB_48982| Best HMM Match : HEAT (HMM E-Value=0.78) 29 4.5
SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 29 4.5
SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_57636| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 29 5.9
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 29 5.9
SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 28 7.8
SB_52337| Best HMM Match : Pox_A32 (HMM E-Value=0.16) 28 7.8
SB_24570| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_24169| Best HMM Match : Pox_A32 (HMM E-Value=0.16) 28 7.8
>SB_26083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 624
Score = 35.1 bits (77), Expect = 0.068
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 115 GPKDFRAHPLNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEP 282
GP P SS HPTS+P +P G P +T P G HP + +EP
Sbjct: 44 GPDHSGGIPTAGSSITNHPTSEPNATNHPT---GEPNATNHPTGEPHPSNHPTSEP 96
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 136 HPLNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEP 282
HP ++ +A HPT +P +P G P + P HP + EP
Sbjct: 61 HPTSEPNATNHPTGEPNATNHPT---GEPHPSNHPTSEPHPSNHPTGEP 106
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 34.7 bits (76), Expect = 0.090
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Frame = +1
Query: 112 RGPKDFRAHPLNDSSALLHPTSDPLRGQNPD-EVGGLPRSTLQPDGAAHPKDAQPTEPSR 288
R P +HP HP P +P G P + P GA HPK P P +
Sbjct: 550 RVPPPGASHPRVPPPGAPHPRVPPPGAPHPRVPPPGTPHPRVPPPGAPHPKVPPPGAPYQ 609
Query: 289 RIEGSETSAVSVRQPVGPPRRCRWCPGIP 375
R+ S + P GPP + PG P
Sbjct: 610 RLPYSGAYHPRL-PPPGPPYQRVPPPGAP 637
Score = 31.5 bits (68), Expect = 0.84
Identities = 28/98 (28%), Positives = 33/98 (33%), Gaps = 1/98 (1%)
Frame = +1
Query: 112 RGPKDFRAHPLNDSSALLHPTSDPLRGQNPD-EVGGLPRSTLQPDGAAHPKDAQPTEPSR 288
R P HP HP P +P G P + P GA HP+ P P +
Sbjct: 440 RFPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHQ 499
Query: 289 RIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPG 402
R+ V P P R PG P R PG
Sbjct: 500 RVPPPGAPHPRVPPPGAPHPRVP-PPGAPH-PRVPPPG 535
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/90 (28%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
Frame = +1
Query: 136 HPLNDSSALLHPTSDPLRGQNPD-EVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETS 312
HP HP P +P G P + P GA HP+ P P R+
Sbjct: 428 HPRVPPPGAPHPRFPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAP 487
Query: 313 AVSVRQPVGPPRRCRWCPGIPRWTRTSLPG 402
V P P +R PG P R PG
Sbjct: 488 HPRVPPPGAPHQRVP-PPGAPH-PRVPPPG 515
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/98 (28%), Positives = 32/98 (32%), Gaps = 1/98 (1%)
Frame = +1
Query: 112 RGPKDFRAHPLNDSSALLHPTSDPLRGQNPD-EVGGLPRSTLQPDGAAHPKDAQPTEPSR 288
R P HP HP P +P G P + P GA HP+ P P
Sbjct: 460 RVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHQRVPPPGAPHPRVPPPGAPHP 519
Query: 289 RIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPG 402
R+ V P P R PG P R PG
Sbjct: 520 RVPPPGAPHPRVPPPGAPHPRVP-PPGAPH-PRVPPPG 555
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/80 (31%), Positives = 29/80 (36%), Gaps = 1/80 (1%)
Frame = +1
Query: 166 HPTSDPLRGQNPD-EVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGP 342
HP P +P G P + P GA HP+ P P R+ S V P P
Sbjct: 508 HPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGASHPRVPPPGAP 567
Query: 343 PRRCRWCPGIPRWTRTSLPG 402
R PG P R PG
Sbjct: 568 HPRVP-PPGAPH-PRVPPPG 585
Score = 29.9 bits (64), Expect = 2.6
Identities = 29/99 (29%), Positives = 34/99 (34%), Gaps = 2/99 (2%)
Frame = +1
Query: 112 RGPKDFRAHPLNDSSALLHPTSDPLRGQNPDEVG--GLPRSTLQPDGAAHPKDAQPTEPS 285
R P +HP HP P G + V G P + P GA HP+ P P
Sbjct: 390 RVPSPGASHPRVPPPGAPHPRVPP-PGASHQRVRPPGAPHPRVPPPGAPHPRFPPPGAPH 448
Query: 286 RRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPG 402
R+ V P P R PG P R PG
Sbjct: 449 PRVPPPGAPHPRVPPPGAPHPRVP-PPGAPH-PRVPPPG 485
>SB_31503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 264 RPADGAFEANRRL*NVGRLGTAARRAAQTVPLVSRNTPLDQNQPAGS 404
+ AD N +L NVG+L + A Q+ L ++ +DQNQ AGS
Sbjct: 207 KAADCRCSKNHQLKNVGKLDISRSAANQSKHLEKQSLQVDQNQRAGS 253
>SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8)
Length = 405
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 169 PTSDPLRGQN-PDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSE 306
PT D L N PDE +P+G +P D+Q +EP+ + + SE
Sbjct: 220 PTPDQLVDANKPDEETSQVSGKEKPEGQENPVDSQLSEPAEQAQESE 266
>SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 622
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDG 331
P +Q P GY G P+AP G P G
Sbjct: 429 PPQQPSYPPGGYGGPPSAPYGAPPG 453
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +3
Query: 177 RSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADG 278
R PPR P GRGA RG P+G P G
Sbjct: 76 RGPPRGHPMRGRGAPYGRGGPPSRGPPRGPPLPG 109
>SB_26017| Best HMM Match : Extensin_2 (HMM E-Value=0.11)
Length = 1704
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 139 PLNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAV 318
PL+ ++AL HP S P+ P ST + H AQ + ++ +TSA
Sbjct: 562 PLSTTAALPHPVSTPMSLSTPPSASSTLSST--QERVNHQAQAQLSASLVPVQAHQTSAK 619
Query: 319 SVRQ-PVGPPRR 351
+V Q +G +R
Sbjct: 620 TVDQTAIGSNKR 631
>SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059)
Length = 765
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/97 (22%), Positives = 35/97 (36%)
Frame = +3
Query: 234 TTRRRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQTVPLVSRNTPLDQNQPAGSGRD 413
TT + P PA N + + + VP NT + Q A
Sbjct: 583 TTLKLNQPDSSPASTPASIPESANNTPLHPSLSSKQETNVPKSDNNTVVT-TQAASFTPA 641
Query: 414 TPSTGRSNHSTXXXXXXXXXXXXLTPSGRPLTFTGGE 524
TPS ++ +T +TP+G P++ GG+
Sbjct: 642 TPSASSADATTPSSMSPQQRTSAMTPNGTPVSMVGGK 678
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2
Query: 384 GPAGYSGTPAAPSGRPDGLPYRDGRR 307
G GY G PA P GR DG+P GR+
Sbjct: 1853 GWKGYPGNPAGPPGR-DGIPGPPGRQ 1877
>SB_48982| Best HMM Match : HEAT (HMM E-Value=0.78)
Length = 390
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 160 LLHPTSDPLRGQNPDEVGGLPRSTLQP---DGAAHPKDAQPTEPSRRIEGSETSAVSVRQ 330
L DP++G P++ ++ L DG H D +PTE RRIE + ++R+
Sbjct: 311 LYKKVKDPVKGFLPNDEPATRKNPLYRSIFDGFDHI-DGKPTESERRIEALQAQLQALRE 369
Query: 331 PVG 339
G
Sbjct: 370 MAG 372
>SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 493
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +3
Query: 177 RSPPRSEPG*GRGATAVNTTT-RRRGSPQGRPADGAFEANRRL*N-VGRLGTAARRAAQT 350
R+PP P +T T RRR + R + + RR + +GR+ T + +
Sbjct: 324 RTPPSFTPRSSISRRRSDTPTKRRRMHREHRSGERVLLSRRRPASAMGRITTKKKTPPRR 383
Query: 351 VPLVSRNTPLDQNQPAGSGRDTPSTGRSNHST 446
V L+ T PAGS R + S+ S ST
Sbjct: 384 VNLLEAFTAAAAGTPAGSRRSSSSSRSSLPST 415
>SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2235
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 PQGRPADGAFEANRRL*NVGRLGTAARRAAQTVPLVSRNTPLDQNQPAG-SGRDTPSTG 428
P RP G EA RRL R+ A + A + V ++P G D PS G
Sbjct: 1858 PATRPHPGRVEAGRRLAKWNRINRAKKEALRVVSAQQLPVAPGPSEPQGLRSDDAPSAG 1916
>SB_57636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 381 PAGYSGTPAAPSGRPDGLPYRDGR 310
P G+SG PAAP+ PD L Y D +
Sbjct: 264 PGGHSGAPAAPAIGPDSL-YGDNK 286
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 234 TTRRRGSPQGRPADGAFEANRRL*N-VGRLGTAARRAAQTVPLVSRNTPLDQNQPAGSGR 410
T RRR + R + + RR + +GR+ T + + V L+ T PAGS R
Sbjct: 631 TKRRRMHREHRSGERVLLSRRRPASAMGRITTKKKTPPRRVNLLEAFTAAAAGTPAGSRR 690
Query: 411 DTPSTGRSN 437
+ S+ RS+
Sbjct: 691 RSSSSSRSS 699
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = -3
Query: 350 RLGGPT---GCRTETADVSEPSIRLEGSVGWASLG*AAPSGCSVDRGSP-PTSSGF*PRR 183
++GG T G +ET+D S+PS+ ++G+ + + P + SP TSS P
Sbjct: 2014 KIGGATIKFGVSSETSDASKPSVADAAALGFLKVPASTPPDTTPSASSPADTSSSSKPSI 2073
Query: 182 G 180
G
Sbjct: 2074 G 2074
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 241 DGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCR 357
DG P QPT+ I+ T + P GPP C+
Sbjct: 70 DGITSPNHTQPTQVLPTIQPPPTHPYRQQGPAGPPVTCQ 108
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +1
Query: 193 QNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGS 303
Q P P+ + QP+ + P+ QP++P + S
Sbjct: 813 QTPQGTSAQPKPSQQPNSTSEPRPQQPSQPKSSAQAS 849
>SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 178 DPLRGQNPDEVGGLPRSTLQP---DGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVG 339
DP++G P++ ++ L DG H D +PTE RRIE + ++R+ G
Sbjct: 730 DPVKGFLPNDEPATRKNPLYRSIFDGFDHI-DGKPTESERRIEALQAQLQALREMAG 785
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 405 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDG 313
P G G G G PA P G P+GLP +G
Sbjct: 239 PGNPGGPGYQGNHGNPAGPQG-PNGLPGPNG 268
>SB_52337| Best HMM Match : Pox_A32 (HMM E-Value=0.16)
Length = 591
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 381 PAGYSGTPAAPSGRPDGLPYRDGR 310
P G+SGTPAAP+ P+ Y D +
Sbjct: 332 PGGHSGTPAAPAVGPESF-YSDNK 354
>SB_24570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 502
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 381 PAGYSGTPAAPSGRPDGLPYRDGR 310
P G+SG PAAP+ P+ L Y D +
Sbjct: 210 PGGHSGAPAAPAVNPESL-YGDNK 232
>SB_24169| Best HMM Match : Pox_A32 (HMM E-Value=0.16)
Length = 591
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 381 PAGYSGTPAAPSGRPDGLPYRDGR 310
P G+SGTPAAP+ P+ Y D +
Sbjct: 332 PGGHSGTPAAPAVGPESF-YSDNK 354
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,012,168
Number of Sequences: 59808
Number of extensions: 470220
Number of successful extensions: 1701
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1680
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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