Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J04
         (778 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67738-2|CAA91546.2|  482|Caenorhabditis elegans Hypothetical pr...    90   1e-18
AL032624-2|CAA21520.2|  447|Caenorhabditis elegans Hypothetical ...    29   3.7  
AC006769-1|AAF60590.2|  287|Caenorhabditis elegans Hypothetical ...    29   4.9  
AC006722-17|ABP57812.1|  141|Caenorhabditis elegans Hypothetical...    29   4.9  
Z92847-6|CAB07423.1| 1076|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z73911-9|CAA98143.1| 1076|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical...    28   8.6  

>Z67738-2|CAA91546.2|  482|Caenorhabditis elegans Hypothetical
           protein W03G11.3 protein.
          Length = 482

 Score = 90.2 bits (214), Expect = 1e-18
 Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
 Frame = -3

Query: 740 SDRFNPGVLLHHKWXT-RSL*LRILGYRXEYANTRNIDD*RMLQQIVTTVSCGGNALINV 564
           SD ++PG LL  KW    +L     G R +   +       +++Q+  T++C GN L+NV
Sbjct: 260 SDHYDPGKLLEKKWENCMTLDKHSWGNRRDMKASEVNTAYEIIEQLARTIACNGNLLLNV 319

Query: 563 GPTKEGTIAPIFEERLLALGDWLQINGEAIYSSSPWEYQNDTLNGKVWYTCSINRSNS-M 387
           GP   G I  IFE+RL  +G ++ I  EAI+ + PW +QNDT    VWYT   +     +
Sbjct: 320 GPNMHGQIPAIFEDRLEEIGRFVNITSEAIFGTRPWIHQNDTSASNVWYTSKYSSGKKPL 379

Query: 386 KRTYRS------GQVTAIYAILLEWPSDNRLSVRSI 297
           K  Y++       + T +YA +L+  S  +  ++S+
Sbjct: 380 KNLYQNVYNFQLEEHTIVYAWILD-TSHEQFELKSV 414


>AL032624-2|CAA21520.2|  447|Caenorhabditis elegans Hypothetical
           protein Y49A10A.1 protein.
          Length = 447

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = -3

Query: 407 INRSNSMKRTYRSGQVTAIYAILLEWPSDNRLSVRSITNSLRSRYNQLEMLGNEGTYLNW 228
           +N +   ++T+  G+V  +  +     S+N+ +   I    + R+N ++  G  G YL W
Sbjct: 382 VNINEEGRKTWTDGRVF-LKDVDASTFSENQFAPGRILQFFKWRFNLVQSSGETGKYLRW 440

Query: 227 KIT 219
           K T
Sbjct: 441 KQT 443


>AC006769-1|AAF60590.2|  287|Caenorhabditis elegans Hypothetical
           protein Y45G12C.8 protein.
          Length = 287

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 392 SMKRTYRSGQVTAIYAILLEWPSDNRLSVRS 300
           ++  +YR   +T   A LL WPS +  S+RS
Sbjct: 66  NLSTSYRVNLITKNIAFLLVWPSSSTASIRS 96


>AC006722-17|ABP57812.1|  141|Caenorhabditis elegans Hypothetical
           protein Y19D10A.17 protein.
          Length = 141

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 392 SMKRTYRSGQVTAIYAILLEWPSDNRLSVRS 300
           ++  +YR   +T   A LL WPS +  S+RS
Sbjct: 66  NLSTSYRVNLITKNIAFLLVWPSSSTASIRS 96


>Z92847-6|CAB07423.1| 1076|Caenorhabditis elegans Hypothetical
           protein T12A7.5 protein.
          Length = 1076

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 422 KLCHLECRFDTPTARSCIWPRR 487
           ++ H+ CR++T T   C W R+
Sbjct: 263 QIAHISCRYNTETTAECEWIRQ 284


>Z73911-9|CAA98143.1| 1076|Caenorhabditis elegans Hypothetical
           protein T12A7.5 protein.
          Length = 1076

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 422 KLCHLECRFDTPTARSCIWPRR 487
           ++ H+ CR++T T   C W R+
Sbjct: 263 QIAHISCRYNTETTAECEWIRQ 284


>AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.11 protein.
          Length = 231

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = -2

Query: 504 RLAPNKRRGHIQLLAVGV--SKRHSKW 430
           +LAP  R+ H+Q+LA+ +  S+ H  W
Sbjct: 53  KLAPEFRKRHVQILAISIDSSETHRDW 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,052,376
Number of Sequences: 27780
Number of extensions: 356431
Number of successful extensions: 900
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)