Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J02
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1397 + 26744154-26744450,26745079-26745138,26745251-267453...    28   10.0 

>08_02_1397 +
           26744154-26744450,26745079-26745138,26745251-26745331,
           26745437-26745637,26745746-26745841,26746479-26746675,
           26746774-26747005
          Length = 387

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 454 IVEGGHGGATSTQYG-PPGHVAGPLH*KKNSLLSFGGSTKYLFIS 323
           +V GGH G      G PPG     +  ++N+LLSFG +  +  ++
Sbjct: 48  MVVGGHRGMGMNAVGAPPGARIEAVRERENTLLSFGRAAAHAAVA 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,189,255
Number of Sequences: 37544
Number of extensions: 297652
Number of successful extensions: 859
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)