Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J01
         (764 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0456 - 25355409-25355751,25356047-25356205,25356317-253565...    30   2.3  
12_02_0385 + 18424617-18425594,18426811-18426850,18427581-184276...    28   7.1  
03_05_0377 + 23613181-23613342,23614469-23614501,23614606-236148...    28   9.4  

>04_04_0456 -
           25355409-25355751,25356047-25356205,25356317-25356513,
           25356602-25356794,25357044-25358287
          Length = 711

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
 Frame = +1

Query: 631 LAWTECSVASGSAVDAIS--SPTGAS*ASLVRYAAGSS 738
           +A+   SVASG   DA S  SPTGAS +SL+ + + +S
Sbjct: 87  VAFFYVSVASGPTADAASFPSPTGASSSSLLSWLSSNS 124


>12_02_0385 +
           18424617-18425594,18426811-18426850,18427581-18427636,
           18428032-18428151
          Length = 397

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 655 ASGSAVDAISSPTGAS*ASLVRYAAGSSPTIPHH 756
           A+ S++   + PT A  ASL+R    +S  +PHH
Sbjct: 60  AATSSLHETAGPTAAESASLLRRGLPTSSKLPHH 93


>03_05_0377 +
           23613181-23613342,23614469-23614501,23614606-23614879,
           23615105-23615585,23616174-23616846
          Length = 540

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 286 YSEDGGKSFDTSRQHLQLYYKY 351
           Y E+ G   DTSRQ +Q Y  Y
Sbjct: 341 YKEENGDKVDTSRQQMQRYTHY 362


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,576,795
Number of Sequences: 37544
Number of extensions: 253799
Number of successful extensions: 462
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)