Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I23
         (813 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0906 - 7124686-7124730,7124854-7124925,7125257-7125383,712...   120   1e-27
05_03_0041 - 7662094-7662138,7662269-7662340,7663144-7663179,766...   117   1e-26
01_06_0861 - 32528419-32529102                                         29   3.3  
12_02_0748 - 22749911-22750135,22752142-22752358,22753177-22753337     28   7.7  

>01_01_0906 -
           7124686-7124730,7124854-7124925,7125257-7125383,
           7125424-7125572,7126126-7126465,7126759-7127090,
           7127327-7127860
          Length = 532

 Score =  120 bits (290), Expect = 1e-27
 Identities = 69/170 (40%), Positives = 107/170 (62%), Gaps = 9/170 (5%)
 Frame = -2

Query: 740 FSSRSYXXDQIXXQTEQMYHLLAICLVLHPQ--CVDESIQQVLREKNYHEKMFKMQYGD- 570
           +  +S   DQI  + EQMY  LA+CL L PQ   +DE++   L+EK Y++KM KMQ  D 
Sbjct: 310 YHQKSPQYDQILKKNEQMYAFLAVCLSLCPQHNLIDENVSTQLKEK-YNDKMTKMQRFDE 368

Query: 569 --LGEFESCFTFACPKFLSACPPPIE-PGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSY 399
                ++  F++ACPKF++  PP ++ P  NY +DA + Q ++F+ EV+QQ++L  IRSY
Sbjct: 369 ETYAAYDELFSYACPKFITPSPPALDQPLTNYNQDAYRLQLKLFLYEVKQQQLLSGIRSY 428

Query: 398 LKLYTTLPMAKLAAFMSAARGSERDAAREHAALAIH---LLCFKHKMKNV 258
           LKLY+T+ +AKLA +M     + R  A ++ +  ++   L+ +KHKM  V
Sbjct: 429 LKLYSTITIAKLAQYMEVDEATLR--AMKNLSQYLYRSILMTYKHKMHAV 476



 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 22/52 (42%), Positives = 38/52 (73%)
 Frame = -3

Query: 229 DGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIK 74
           +GK  S ++ DFYI  D+IH+ ++K   R+GD+F+R++LKFEE+  +L  ++
Sbjct: 479 NGKIVSSADFDFYIKEDVIHVMESKPIKRHGDYFLRQILKFEEMIGELEKVQ 530


>05_03_0041 -
           7662094-7662138,7662269-7662340,7663144-7663179,
           7663356-7663449,7663533-7663681,7664525-7664864,
           7666417-7666748,7667348-7667821
          Length = 513

 Score =  117 bits (282), Expect = 1e-26
 Identities = 69/167 (41%), Positives = 102/167 (61%), Gaps = 6/167 (3%)
 Frame = -2

Query: 740 FSSRSYXXDQIXXQTEQMYHLLAICLVLHPQ--CVDESIQQVLREKNYHEKMFKM-QYGD 570
           +   S   DQ+  + EQMY LLAICL L PQ   +DE++   L+EK Y +KM KM +Y D
Sbjct: 290 YHQNSPQYDQLLKKNEQMYALLAICLSLCPQDKLIDENVGTQLKEK-YGDKMTKMHRYDD 348

Query: 569 --LGEFESCFTFACPKFLSACPPPI-EPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSY 399
                ++  F++ACPKF++A PP + EP  NY +DA + Q ++F+ EV+QQ++L  IRSY
Sbjct: 349 EAYAIYDELFSYACPKFITASPPVLREPYTNYNQDAYRLQLKLFLYEVKQQQLLSGIRSY 408

Query: 398 LKLYTTLPMAKLAAFMSAARGSERDAAREHAALAIHLLCFKHKMKNV 258
           LKLY+T+ + KLA +M            +   L   L+ +KHKM ++
Sbjct: 409 LKLYSTITIGKLAKYMDV----------DEVTLRTILMTYKHKMHSI 445



 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 12/64 (18%)
 Frame = -3

Query: 229 DGKFQSGSELDFYIDN------------DMIHIADTKVAHRYGDFFIRKLLKFEELNRKL 86
           DGK  S ++ DFYID             D+IH+ ++K+   +GD+F+R++LKFEE+  +L
Sbjct: 448 DGKVISSADFDFYIDECMQQPLVWFPAEDIIHVVESKLTKNHGDYFLRQILKFEEMITQL 507

Query: 85  HHIK 74
             ++
Sbjct: 508 DKVQ 511


>01_06_0861 - 32528419-32529102
          Length = 227

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 273 VLEAEQVNGESRMFTCRVTLTAASSRHECS*FRHREGGV*FQIGTYGRKH 422
           ++  E  + E R+ T R T +  S     + + HR GG+ F+  TYGR H
Sbjct: 3   IVGEEYCSAEERVLTVRKT-SHFSPGDGFAAYDHRTGGLAFRADTYGRGH 51


>12_02_0748 - 22749911-22750135,22752142-22752358,22753177-22753337
          Length = 200

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -2

Query: 365 LAAFMSAARGSERDAAREHAALAIHLLCFKHKMKNVVW 252
           LA F   A G+        AA A+HLLCF       VW
Sbjct: 6   LAVFFLLAGGAGLGMTAAAAAKAVHLLCFATSWGVTVW 43


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,388,558
Number of Sequences: 37544
Number of extensions: 491997
Number of successful extensions: 1200
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)