Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I18
         (863 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F695 Cluster: Glycosyl-phosphatidyl-inositol-anchored...   149   7e-35
UniRef50_Q234L5 Cluster: MRNA capping enzyme, large subunit fami...    39   0.14 
UniRef50_P54122 Cluster: UPF0036 protein Cgl1970/cg2160; n=31; A...    36   1.0  
UniRef50_Q0KJF2 Cluster: Putative uncharacterized protein ORF159...    36   1.7  
UniRef50_Q7RZY6 Cluster: Predicted protein; n=6; Pezizomycotina|...    35   3.1  
UniRef50_Q5V4I3 Cluster: MCP domain signal transducer; n=1; Halo...    34   5.3  
UniRef50_Q6RI45 Cluster: Bromodomain and WD repeat-containing pr...    34   5.3  
UniRef50_Q0V456 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  

>UniRef50_Q2F695 Cluster: Glycosyl-phosphatidyl-inositol-anchored
           protein; n=1; Bombyx mori|Rep:
           Glycosyl-phosphatidyl-inositol-anchored protein - Bombyx
           mori (Silk moth)
          Length = 615

 Score =  149 bits (362), Expect = 7e-35
 Identities = 67/81 (82%), Positives = 68/81 (83%)
 Frame = -2

Query: 451 REGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHAXXXXXXXXXXXGFQGGYKGRSR 272
           REGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHA           GFQGGYKGR R
Sbjct: 529 REGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHAENGRERYGEGNGFQGGYKGRGR 588

Query: 271 GAPRGATRGASRPPRAQHYXK 209
           GAPRGATRGASRPPRAQHY +
Sbjct: 589 GAPRGATRGASRPPRAQHYTR 609



 Score = 75.4 bits (177), Expect = 2e-12
 Identities = 38/73 (52%), Positives = 41/73 (56%)
 Frame = -3

Query: 816 LXAPVXAXXXAAXXXXPVXHTMQPXFVXXLYTPLXRPFCKKILRRFRP*PDKEDDCRKDG 637
           L  P+     AA    PV HTMQP  V  L      P  ++      P  DKEDDCRKDG
Sbjct: 408 LPPPLPPVTHAAPPPQPVHHTMQPALVATLVHASVTPVLQEDTSPVSPVTDKEDDCRKDG 467

Query: 636 PSPELENGGDRKG 598
           PSPELENGGDRKG
Sbjct: 468 PSPELENGGDRKG 480


>UniRef50_Q234L5 Cluster: MRNA capping enzyme, large subunit family
           protein; n=1; Tetrahymena thermophila SB210|Rep: MRNA
           capping enzyme, large subunit family protein -
           Tetrahymena thermophila SB210
          Length = 702

 Score = 39.1 bits (87), Expect = 0.14
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
 Frame = -2

Query: 469 TKTDRTREGFQNRQYDGYQNRHANRTGGDGYYG-NGDVSEGAHHAXXXXXXXXXXXGFQG 293
           T  +  R G  NR+  GY N+    + GD Y+G +G      HH              QG
Sbjct: 87  TYQNSDRRGGDNRRGGGYGNKDRYASSGDNYHGSHGGSGTNNHHGNGGYQNNNNSSYNQG 146

Query: 292 GYKGRSRGAPRGATRG 245
           GY G +  +  G +RG
Sbjct: 147 GYSGNNHSS--GGSRG 160


>UniRef50_P54122 Cluster: UPF0036 protein Cgl1970/cg2160; n=31;
           Actinobacteria (class)|Rep: UPF0036 protein
           Cgl1970/cg2160 - Corynebacterium glutamicum
           (Brevibacterium flavum)
          Length = 718

 Score = 36.3 bits (80), Expect = 1.0
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
 Frame = -2

Query: 601 GETPRVDTDVSVAA-AEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTREGFQNRQY 425
           G+   +DT V  A  A ++++ + AE      +   A GA     ++  +  +G QNR+ 
Sbjct: 21  GQENHLDTPVFQAPDASSNQSAVKAETAGNDNRDA-AQGAQGSQDSQGSQNAQGSQNRE- 78

Query: 424 DGYQNRHA---NRTGGDGYYGNGDVSEGAHHAXXXXXXXXXXXGFQGGYKGRSRGAPRGA 254
            G  NR+    NR GG G  G+G+ +EGA++            G +GG +     + +GA
Sbjct: 79  SGNNNRNRSNNNRRGGRGRRGSGNANEGANNNSGNQNRQGGNRGNRGGGRRNVVKSMQGA 138

Query: 253 --TRGASRPPRA 224
             T+    PP+A
Sbjct: 139 DLTQRLPEPPKA 150


>UniRef50_Q0KJF2 Cluster: Putative uncharacterized protein ORF159;
           n=1; Sphingomonas sp. KA1|Rep: Putative uncharacterized
           protein ORF159 - Sphingomonas sp. KA1
          Length = 185

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -2

Query: 535 AAEALSLIVKAVTAIGADKVVITKTDRTREGFQNRQYDGYQNRHANRTGG 386
           AA   + + + V A+G   V    +D  R G   R Y GY   H NR GG
Sbjct: 98  AARIDAAVEEQVQAVGRANVSRAISDLVRAGLMTRHYAGYATNHKNRGGG 147


>UniRef50_Q7RZY6 Cluster: Predicted protein; n=6;
           Pezizomycotina|Rep: Predicted protein - Neurospora
           crassa
          Length = 318

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 17/27 (62%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
 Frame = -2

Query: 292 GYKGRSRGAPRGATRGASR--PPRAQH 218
           G  GR RGAPRGA RGA+R   PRA++
Sbjct: 274 GDAGRGRGAPRGAARGAARGGAPRAEN 300


>UniRef50_Q5V4I3 Cluster: MCP domain signal transducer; n=1;
           Haloarcula marismortui|Rep: MCP domain signal transducer
           - Haloarcula marismortui (Halobacterium marismortui)
          Length = 850

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 23/65 (35%), Positives = 35/65 (53%)
 Frame = -3

Query: 387 ATDIMATVTCQKVHITPRTVVSGMEKATASREDTRDAVEELLEEQHAVRLGLPALNTTXR 208
           ATD +AT + Q+VH      VS M     S EDTR +V   L+E  AV   +  ++++ +
Sbjct: 304 ATDEIAT-SIQEVHEQADATVSEMHDTRDSVEDTRSSVASALDELDAVVSMVEEVDSSVQ 362

Query: 207 RSDNA 193
             D+A
Sbjct: 363 EIDDA 367


>UniRef50_Q6RI45 Cluster: Bromodomain and WD repeat-containing protein
            3; n=14; Tetrapoda|Rep: Bromodomain and WD
            repeat-containing protein 3 - Homo sapiens (Human)
          Length = 1802

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = -2

Query: 457  RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
            R +   + +  +G +N     TGG G +G  G  S G               G  GG +G
Sbjct: 1649 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1706

Query: 280  RSRG-APRGATRGASRPPRAQ 221
            R RG   RGA+RGA+R  RA+
Sbjct: 1707 RGRGRGGRGASRGATRAKRAR 1727


>UniRef50_Q0V456 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 463

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -2

Query: 367 GDVSEGAHHAXXXXXXXXXXXGFQGGYKGRSRGAPRGATRGASR 236
           GD     HH              +GG++GR RG PRG  RG  R
Sbjct: 395 GDGFHEVHHNRGGRGRGGHQGEGRGGFRGRGRGGPRGDFRGRGR 438


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,189,695
Number of Sequences: 1657284
Number of extensions: 12074546
Number of successful extensions: 36474
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36342
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)