Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I18
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0970 + 7664552-7664570,7664696-7664733,7665661-7666510,766...    33   0.39 
04_04_0998 - 29996117-29996242,29996345-29996486,29996613-299968...    31   1.2  
05_07_0125 + 27861368-27862282                                         31   1.6  
02_04_0097 - 19673312-19673836                                         30   2.1  
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489...    30   2.1  
11_06_0184 - 21006659-21009823                                         29   4.8  
10_08_0771 + 20463872-20465113                                         29   4.8  
06_01_1074 - 8765183-8765278,8765657-8765749,8766520-8766600,876...    28   8.4  

>01_01_0970 +
           7664552-7664570,7664696-7664733,7665661-7666510,
           7666608-7666699
          Length = 332

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = -3

Query: 417 TKIGMRTVPVATDIMATVTCQKV-HITPRTVVSGMEKATASREDTRDAVEELLEEQHAVR 241
           T  G   +P    I+A  T +++  + PR V SG+ KA  +R    D  +    E   V 
Sbjct: 225 TAAGELVLPAFDKILAGCTAKRLLALAPRLVESGLLKAVTTRHIAADEAKRCSAEMAFVG 284

Query: 240 LGLPAL 223
            GLP L
Sbjct: 285 SGLPVL 290


>04_04_0998 -
           29996117-29996242,29996345-29996486,29996613-29996812,
           29997112-29997497,29997769-29998318,29998949-29999296
          Length = 583

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = -2

Query: 541 VIAAEALSLIVKAVTAIGADKVVITKTDRTREGFQNRQYDGYQNRHANRTGGDGYYGNGD 362
           V AAEA S + +AVTA  A +V +  T+   +G   ++ D  +N    +   D  Y + D
Sbjct: 65  VAAAEAESRLEEAVTAAAAARVGLCCTEEKGKGKGEKEEDEIRNNRQRQE--DEIYIHYD 122

Query: 361 VSEGA 347
           +++GA
Sbjct: 123 LNDGA 127


>05_07_0125 + 27861368-27862282
          Length = 304

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 26/84 (30%), Positives = 33/84 (39%)
 Frame = -2

Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHAXXXXXXXXXXXGFQGGYKGR 278
           R R G ++R  D  + R   R GGDGY G G    G  +            G +GG    
Sbjct: 202 RHRRGNRDRD-DFRRERDGYRGGGDGYRGGGGGGGGDGYRGGDSYRGGGGGGRRGGGSRY 260

Query: 277 SRGAPRGATRGASRPPRAQHYXKE 206
            R    G  R  S P RA+   +E
Sbjct: 261 DRYDDGGRRRHGSPPRRARSPVRE 284


>02_04_0097 - 19673312-19673836
          Length = 174

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 598 PLTVATVL*LWTRXIFSAIVFFIGSRAKPAKYLLAERAXQRRV 726
           P  +A  L  WTR  F   +  IG+  KP  YL A R   R V
Sbjct: 81  PAALAPPLPAWTRAAFPPPISVIGAGGKPWLYLRAHRGDGRLV 123


>01_01_0645 +
           4890647-4890682,4891684-4891929,4892021-4892317,
           4892407-4892574,4892674-4892841,4892924-4893004,
           4893105-4893171,4893657-4893751,4894027-4894099,
           4894177-4894247,4894325-4894374,4895263-4895375,
           4895461-4895513
          Length = 505

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = -3

Query: 471 LPKQIEPGKDFKTDNMTATKIGMRTVP-VATDIMATVTCQKVHITPRTV 328
           LP  +EPGK   T      KI   T P  +  +   V C  VH  P T+
Sbjct: 68  LPDLVEPGKTKITTLANGVKIASETTPGPSCSVGVYVNCGSVHEAPETL 116


>11_06_0184 - 21006659-21009823
          Length = 1054

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 690 LRRFRP*PDKEDDCRKDGPSPELENGGDRKGRLP 589
           +++ +P P + D   K+ P P L +GGD+   LP
Sbjct: 246 IKQQQPLPPQSDGGDKEQPPPSLSDGGDKDQPLP 279


>10_08_0771 + 20463872-20465113
          Length = 413

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 280 VPCILPGSRCLLHTAHDRSRRDVHLLTRHR 369
           V C++P + C L  AHD  RR +   TR R
Sbjct: 10  VLCLIPPTMCSLAAAHDDLRRGLEQATRGR 39


>06_01_1074 -
           8765183-8765278,8765657-8765749,8766520-8766600,
           8767092-8767173,8767261-8767313,8767391-8767456,
           8767534-8767697,8768028-8768295
          Length = 300

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 517 LIVKAVTAIGADKVVITKTDRTREGFQNRQYDGYQNRHANRTG 389
           LI++ +     D V + + DR R+     +  GYQ+R   RTG
Sbjct: 128 LIIREIRHWDPDLVCLQEVDRFRDIATEMENRGYQSRFKGRTG 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,428,285
Number of Sequences: 37544
Number of extensions: 364049
Number of successful extensions: 1247
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)