Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_I14
(818 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0077 - 546033-546223,546314-546566,546635-546865,547165-54... 31 1.1
01_06_1179 - 35161229-35162368 31 1.1
09_03_0166 + 12956794-12956832,12956936-12956977,12957084-129571... 30 1.9
04_04_0110 + 22840636-22840720,22840958-22841310 30 1.9
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 30 2.5
02_05_0849 + 32202610-32202880,32204234-32205711,32205993-322061... 30 2.5
03_05_0737 + 27258320-27259007,27259263-27259435,27262684-272627... 29 4.4
09_01_0011 + 291315-292277 29 5.9
11_06_0034 - 19448316-19449767 28 7.8
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 28 7.8
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 7.8
03_01_0646 + 4742398-4742994,4743681-4744085 28 7.8
>02_01_0077 -
546033-546223,546314-546566,546635-546865,547165-547331,
547369-548008
Length = 493
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 179 GVVVSPLAPAYNDSPEPMDTDDKEEESQDS 90
G+ VSP +P Y+DSPEP D + D+
Sbjct: 45 GLPVSPPSPGYSDSPEPPLPDSPPSQEPDT 74
>01_06_1179 - 35161229-35162368
Length = 379
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 347 PPRTGPAAPRSPAGTTRPP 403
PP PAA RSPA TT+PP
Sbjct: 289 PPPPPPAAARSPAPTTKPP 307
>09_03_0166 +
12956794-12956832,12956936-12956977,12957084-12957149,
12957237-12957350,12957435-12957515,12957613-12957690,
12958702-12958784,12959645-12959726,12959801-12959901,
12960016-12960055,12960162-12960221,12960302-12960348,
12960437-12960575,12960716-12960931,12961010-12961344,
12961525-12961596,12962449-12962589,12962680-12962716,
12962837-12963256
Length = 730
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 222 RGRQGHILGDHGVGRRGGLPASAR 151
RG+ GH+ G HGV + G+ +S+R
Sbjct: 530 RGKTGHVHGHHGVTKSSGVTSSSR 553
>04_04_0110 + 22840636-22840720,22840958-22841310
Length = 145
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 456 SASGLTHQRGIPPRVVSDGGRVVPAGLRGAAGPV-RGGALP 337
SA L + V+DG R +PAG++G+AG + GG P
Sbjct: 5 SAMALAFAVVVMSSCVADGVRTIPAGVQGSAGGLHNGGTAP 45
>07_03_0860 +
22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = -3
Query: 576 SSIKVLIRLSPGHVFSALRTRTP-DAVDDRSARAPLHHEQPSASGLTHQRGIPPRVVSDG 400
S +K + +SP V + R P + P HH+ P G H IPP+ V
Sbjct: 650 SQVKSSVHVSPS-VPNVAPPRPPVQQIPGMPMSMPFHHQAPLQFG-GHNPQIPPQGVVPS 707
Query: 399 GRVVPAGLRGAAGP 358
+ GL GA P
Sbjct: 708 SLQMSMGLHGANAP 721
>02_05_0849 +
32202610-32202880,32204234-32205711,32205993-32206143,
32206378-32206559
Length = 693
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 521 GLEPLTPWMIDLLAHHCIMNNPQRQALPINVAFRRA 414
GL LTPW++ +H + + P R+A+ I F +A
Sbjct: 517 GLSGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQA 552
>03_05_0737 +
27258320-27259007,27259263-27259435,27262684-27262758,
27262832-27263296
Length = 466
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 221 EGGKDISLEITVWDGVVVSPLAPAYNDSPEPMDTDDKE 108
E G + L V + +VVSP APA +S D+KE
Sbjct: 254 EMGAAVDLSAAVQESMVVSPEAPAVEESQAEGHKDEKE 291
>09_01_0011 + 291315-292277
Length = 320
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +2
Query: 365 AAPRSPAGTTRPPSETTRGGMPR*WVRPDAEGCS*CSGARADLSSTASGVRVRSAENTCP 544
AA R A T +PP E G P+ RP S S A+ L + + A N P
Sbjct: 45 AARRRSARTKKPPEEEAAGSQPQPKTRPSP--ASKASKAKVLLLLGDGEPKKKPAPNPTP 102
Query: 545 GERRIN 562
++R N
Sbjct: 103 TQKRSN 108
>11_06_0034 - 19448316-19449767
Length = 483
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = -3
Query: 552 LSPGHVFSALRTRTPDAVDDRSARAPLHHEQPSASGLTHQRGIPPRVVSDGGRVVPAGLR 373
L G+ F D +DD +AR +PSA+ +R R A +R
Sbjct: 341 LEKGYFFQGYWVEVVDRLDDIAARYEAAERRPSAAAAHLRRRHAEREHERYAAARNAAVR 400
Query: 372 GAA-GPVRGG 346
GA GP GG
Sbjct: 401 GAVPGPAGGG 410
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 519 TRTPDAVDDRSARAPLHHEQPSASGLTHQRGIPPRVVSDGG 397
TR P+A +R R+PLH +P G + +RG S GG
Sbjct: 445 TRGPEAGAERDGRSPLHLGRP--RGWSRRRGAESSPQSRGG 483
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = +2
Query: 347 PPRTGPAAPRSPA---GTTRPPSETTRGG 424
PP PAAPR P G PP RGG
Sbjct: 353 PPPAAPAAPRPPGPGPGPPPPPGAAGRGG 381
>03_01_0646 + 4742398-4742994,4743681-4744085
Length = 333
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = -3
Query: 483 RAPLHHEQPSASGLTHQRGIPPRVVSDGGR--VVP--AGLRGAAGPVRGGAL 340
RA + PSA+G R +PP + G VP AG+R A G AL
Sbjct: 213 RAEVERATPSAAGACASRSLPPAAILSGAPSCSVPFSAGVRFPAAGASGAAL 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,260,063
Number of Sequences: 37544
Number of extensions: 358346
Number of successful extensions: 1714
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1711
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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