Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_I11
(813 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 225 4e-60
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 222 4e-59
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 82 8e-17
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 52 7e-08
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 35 0.012
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 29 1.0
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.4
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.5
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 26 5.5
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 9.7
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 25 9.7
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 25 9.7
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.7
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 225 bits (551), Expect = 4e-60
Identities = 100/128 (78%), Positives = 115/128 (89%), Gaps = 1/128 (0%)
Frame = -3
Query: 511 WLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 335
++A C RGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VPG +AKV
Sbjct: 316 YMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKV 375
Query: 334 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 155
RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+D
Sbjct: 376 NRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERD 435
Query: 154 YEEVGMDS 131
YEEVG DS
Sbjct: 436 YEEVGQDS 443
Score = 68.5 bits (160), Expect = 1e-12
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = -1
Query: 666 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEP 556
YPRIHFPLVTY+P++SA KA+HE SV EITN CFEP
Sbjct: 266 YPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEP 302
Score = 46.8 bits (106), Expect = 4e-06
Identities = 36/100 (36%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Frame = -2
Query: 779 PTYTNLXXXXXXXXXXXXX*XRRRSEL--DLTEXQXNLVXTPVSTSHWSRTRQSSL-PRR 609
PTY NL R L DL E Q NLV P H+ S +
Sbjct: 226 PTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLV--PYPRIHFPLVTYSPIVSAA 283
Query: 608 PTMNSFPSPRSQTHASSPP-NQMVKCDPRHGKYMACCMLY 492
+ S + T+ P NQMVKCDPR G+YMA C+LY
Sbjct: 284 KAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLY 323
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 222 bits (543), Expect = 4e-59
Identities = 100/131 (76%), Positives = 114/131 (87%), Gaps = 1/131 (0%)
Frame = -3
Query: 520 ASTWLAVCCT-RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 344
A ++A C RGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +PP + G ++
Sbjct: 309 AGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEI 368
Query: 343 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 164
AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAAL
Sbjct: 369 AKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 428
Query: 163 EKDYEEVGMDS 131
E+DYEEVG DS
Sbjct: 429 ERDYEEVGQDS 439
Score = 69.7 bits (163), Expect = 5e-13
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = -1
Query: 666 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEP 556
YPRIHFPLVTYAP++SA KA+HE SV EITN CFEP
Sbjct: 262 YPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEP 298
Score = 45.2 bits (102), Expect = 1e-05
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -2
Query: 701 LDLTEXQXNLVXTPVSTSHWSRTRQSSL-PRRPTMNSFPSPRSQTHASSPP-NQMVKCDP 528
+DL E Q NLV P H+ + + + S + T+ P NQMVKCDP
Sbjct: 250 VDLAEFQTNLV--PYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDP 307
Query: 527 RHGKYMACCMLY 492
R G+YMA C+LY
Sbjct: 308 RAGRYMATCLLY 319
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 82.2 bits (194), Expect = 8e-17
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Frame = -3
Query: 490 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 311
RG V K+V+ I +++TK + FV+W P + PP DL + + +
Sbjct: 318 RGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL---KMSATFIG 369
Query: 310 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVG 140
N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA DL + + Y+E G
Sbjct: 370 NSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAG 429
Query: 139 MD 134
+D
Sbjct: 430 ID 431
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -1
Query: 666 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 559
+PR+HF +V +AP+ + + + +SV E+T F+
Sbjct: 260 FPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFD 295
Score = 29.1 bits (62), Expect = 0.79
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 551 NQMVKCDPRHGKYMACCMLY 492
N MV DPRHG+Y+ L+
Sbjct: 298 NMMVAADPRHGRYLTVAALF 317
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 52.4 bits (120), Expect = 7e-08
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Frame = -3
Query: 580 DHKRMLRARQTRW*NATPVMASTWLAVC-CTRGDVVPKDVNAAIATIKTKRTIQFVDWCP 404
D R L + + + P S ++++ +G+ P DV+ ++ I+ +R F+ W P
Sbjct: 294 DVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGP 353
Query: 403 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 224
+V ++ + P + ++ + ML+N T+IA + R ++D + + AF+ Y
Sbjct: 354 ASIQVALSKKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQY 408
Query: 223 VGEGMEE---GEFSEAREDLAALEKDYE 149
E + E EF +R+ +A L +YE
Sbjct: 409 KKEAIFEDDLNEFDSSRDVVADLINEYE 436
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 35.1 bits (77), Expect = 0.012
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 498 AVPVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 355
A PVV P + RP++P P LS V PV+ V + PP P
Sbjct: 549 AAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 31.5 bits (68), Expect = 0.15
Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Frame = -1
Query: 633 APVISAEKAYHEQLSVAEITNACFEPAKPDGEMRP--PSWQVHGLLYAVPVVTSYPRM*T 460
APV+ + ++ +V + A P P + P PS + VP S P+
Sbjct: 550 APVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPV 609
Query: 459 RPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPE 352
P P PSV + V P + SV P PE
Sbjct: 610 APVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPE 645
Score = 29.5 bits (63), Expect = 0.59
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -1
Query: 498 AVPVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 355
A PVV P + RP++P P S PV V + PP P
Sbjct: 639 AAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
Score = 27.9 bits (59), Expect = 1.8
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = -1
Query: 558 PAKPDGEMRPPSWQVHGLLYA--VPVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSV 385
P P + P + VH A P V S P+ P +P PSV + V P + SV
Sbjct: 515 PQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSV 574
Query: 384 STTSHPPWCPE 352
P PE
Sbjct: 575 PQPPVAPVAPE 585
Score = 27.5 bits (58), Expect = 2.4
Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Frame = -1
Query: 648 PLVTYAPVISAEKAYHEQLSVAEITNACFEPAKPDGEMRP--PSWQVHGLLYAVPVVTSY 475
P APV + ++ +V + A P P + P PS + VP S
Sbjct: 605 PQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSV 664
Query: 474 PRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 355
P+ P +P PSV + V P + ++ PP P
Sbjct: 665 PQPPAAPVVPEVPSVPQPPAVPVVPEAGQLNEPVVPPLPP 704
Score = 27.1 bits (57), Expect = 3.2
Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Frame = -1
Query: 558 PAKPDGEMRP--PSWQVHGLLYAVPVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSV 385
P P + P PS + VP S P+ P +P PSV + V P + SV
Sbjct: 605 PQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSV 664
Query: 384 STTSHPPWCPE 352
P PE
Sbjct: 665 PQPPAAPVVPE 675
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 495 VPVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEA 349
VP V S P+ P +P PSV + V P SV P PEA
Sbjct: 643 VPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVPEA 691
Score = 26.6 bits (56), Expect = 4.2
Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
Frame = -1
Query: 663 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAKPDGEMRPPSWQVHGLLYA--VP 490
P +H P APV + ++ + + A P +P + P + V A P
Sbjct: 527 PSVHQPPA--APVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAP 584
Query: 489 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEA 349
V S P+ P +P PSV V P SV P PEA
Sbjct: 585 EVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEA 631
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -1
Query: 492 PVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEA 349
P V S P+ P +P PSV + V P SV P PEA
Sbjct: 614 PEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEA 661
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 28.7 bits (61), Expect = 1.0
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 11/63 (17%)
Frame = -2
Query: 677 NLVXTPVSTSHWSRTRQSSLPRRPTMNSF-----------PSPRSQTHASSPPNQMVKCD 531
N V + +S++S S+LP P + F PS + ++ S+ PNQ +K
Sbjct: 197 NFVKRDIDSSNFSNLDASALPISPPSDFFSVHSHNLPNAPPSIPANSNNSASPNQRIKAS 256
Query: 530 PRH 522
P+H
Sbjct: 257 PKH 259
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 285 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 112
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 111 EPKSTK 94
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -1
Query: 453 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 367
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.2 bits (55), Expect = 5.5
Identities = 26/101 (25%), Positives = 40/101 (39%)
Frame = -1
Query: 492 PVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVXXXXX 313
PVV + P T+P S P+ S + PVS + T + PP A R N
Sbjct: 988 PVVQNKPAA-TKPV--SMPAAKSKPAPMANPVSTAQQTQNRPP--APAMQARPNTTQAAA 1042
Query: 312 XXXXXXPKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSP 190
+ A T S++ PS ++ +S + S+P
Sbjct: 1043 PVTSTTTTIKQATTVSASKPAPSTVTSAASSPSNISKPSAP 1083
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -1
Query: 558 PAKP--DGEMRPPSWQVHGLLYAVPVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSV 385
P +P +G PP V Y P P +P+ P++PS+ + V+ + R +
Sbjct: 407 PVQPVQNGVPAPPMQPVQSTQYYQPSSPVQPVQNVKPAQPAQPSLEDAAKRRVEEMLRQM 466
Query: 384 STT 376
T
Sbjct: 467 DIT 469
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 591 SVAEITNACFEPAKPDGEMRPPSWQV 514
SV ++T ACFEP+ ++ P W +
Sbjct: 800 SVTKVTCACFEPSLDYVVVKIPRWDL 825
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 629 QSSLPRRPTMNSFPSPRSQTHASSPP 552
+ SLPRRP+ +P S T ++ PP
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPP 763
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 456 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 361
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,028,975
Number of Sequences: 5004
Number of extensions: 64548
Number of successful extensions: 243
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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