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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I10
         (793 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch...   343   2e-95
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar...   339   2e-94
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces...   140   2e-34
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|...    75   9e-15
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    31   0.14 
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1...    31   0.19 
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    29   0.58 
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    29   0.76 
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||...    29   1.0  
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo...    28   1.3  
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl...    28   1.3  
SPAC9G1.08c |||phospholipase |Schizosaccharomyces pombe|chr 1|||...    27   2.3  
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom...    27   2.3  
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||...    26   5.4  
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c...    26   5.4  
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch...    26   5.4  
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch...    26   7.1  
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po...    25   9.4  
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz...    25   9.4  

>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 455

 Score =  343 bits (842), Expect = 2e-95
 Identities = 150/186 (80%), Positives = 169/186 (90%)
 Frame = -2

Query: 687 EFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 508
           EFQTNLVPYPRIHFPLVTY+P++SA KA+HE  SV EITN CFEP NQMVKCDPR G+YM
Sbjct: 258 EFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYM 317

Query: 507 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQR 328
           A C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP  VPG  +AKV R
Sbjct: 318 ATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNR 377

Query: 327 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 148
           AVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYE
Sbjct: 378 AVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYE 437

Query: 147 EVGMDS 130
           EVG DS
Sbjct: 438 EVGQDS 443



 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 27/46 (58%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = -1

Query: 784 QPT-PNXXRLIGQIVSSITASLRFDGALNVDLTRVPD*LGALPPYP 650
           +PT  N  RLI Q+VSSITASLRF G+LNVDL         L PYP
Sbjct: 225 RPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQT---NLVPYP 267


>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
           2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 449

 Score =  339 bits (834), Expect = 2e-94
 Identities = 150/186 (80%), Positives = 167/186 (89%)
 Frame = -2

Query: 687 EFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 508
           EFQTNLVPYPRIHFPLVTYAP++SA KA+HE  SV EITN CFEP NQMVKCDPR G+YM
Sbjct: 254 EFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYM 313

Query: 507 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQR 328
           A C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI  +PP  + G ++AKV R
Sbjct: 314 ATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDR 373

Query: 327 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 148
           AVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYE
Sbjct: 374 AVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYE 433

Query: 147 EVGMDS 130
           EVG DS
Sbjct: 434 EVGQDS 439



 Score = 46.4 bits (105), Expect = 5e-06
 Identities = 25/41 (60%), Positives = 28/41 (68%)
 Frame = -1

Query: 772 NXXRLIGQIVSSITASLRFDGALNVDLTRVPD*LGALPPYP 650
           N  RLI Q+VSSITASLRF+G+LNVDL         L PYP
Sbjct: 226 NLNRLIAQVVSSITASLRFEGSLNVDLAEFQT---NLVPYP 263


>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 448

 Score =  140 bits (340), Expect = 2e-34
 Identities = 69/184 (37%), Positives = 109/184 (59%), Gaps = 3/184 (1%)
 Frame = -2

Query: 675 NLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCM 496
           N+VP+PR+HF +V +AP+ +   +  + +SV E+T   F+  N MV  DPRHG+Y+    
Sbjct: 256 NMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAA 315

Query: 495 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 316
           L+RG V  K+V+  I +++TK +  FV+W P      +   PP      DL   + +   
Sbjct: 316 LFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL---KMSATF 367

Query: 315 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEE 145
           + N+T+I E + RL  +F  M+ ++AF+HWY GEGM+E EF+EA     DL +  + Y+E
Sbjct: 368 IGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 427

Query: 144 VGMD 133
            G+D
Sbjct: 428 AGID 431


>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 446

 Score = 75.4 bits (177), Expect = 9e-15
 Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 7/183 (3%)
 Frame = -2

Query: 675 NLVPYPRIHFPLVTYAPVISA---EKAYHEQLSVAEITNACFEPANQMVKCDP-RHGKYM 508
           +L+P PR HF L +Y P  +    E     + +V ++      P NQMV  +P +   ++
Sbjct: 259 SLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFI 318

Query: 507 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQR 328
           +   + +G+  P DV+ ++  I+ +R   F+ W P   +V ++ + P +     ++ +  
Sbjct: 319 SILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL-- 376

Query: 327 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEK 157
              ML+N T+IA  + R   ++D +  + AF+  Y  E + E    EF  +R+ +A L  
Sbjct: 377 ---MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLIN 433

Query: 156 DYE 148
           +YE
Sbjct: 434 EYE 436


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 31.5 bits (68), Expect = 0.14
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
 Frame = -3

Query: 707 SECGPHPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTM--NSFPSPRSQTHASSPPTRW*N 534
           S  G   S  L+   +  +++    T  S+ P  PT+   S  +P + T+ ++  +    
Sbjct: 377 SSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYT 436

Query: 533 ATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 366
           +TPV ++      CT  TS P   T   + S P   +N +T       S   TS P
Sbjct: 437 STPVTSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490



 Score = 30.3 bits (65), Expect = 0.33
 Identities = 29/105 (27%), Positives = 50/105 (47%)
 Frame = -3

Query: 686 SSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTW 507
           S+ + +  TPV++S++  T  SS P   T      P + T+ ++  +    +TPV ++  
Sbjct: 499 STSVPYTSTPVTSSNY--TISSSTPVTST------PVTTTNCTTSTSVLYTSTPVTSTPL 550

Query: 506 LAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 372
               CT  TS P   T P   S  ++ S++     PV+ +  TTS
Sbjct: 551 ATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594



 Score = 27.9 bits (59), Expect = 1.8
 Identities = 25/97 (25%), Positives = 44/97 (45%)
 Frame = -3

Query: 662 TPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 483
           TP++T++   T  +S+P   T  +  +P + T+ ++  +    +TPV ++      CT  
Sbjct: 420 TPLTTTNC--TTSTSVPYTSTPVT-STPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTS 476

Query: 482 TSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 372
           TS P   T   + S P   +N +T       S   TS
Sbjct: 477 TSIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511



 Score = 26.6 bits (56), Expect = 4.1
 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
 Frame = -3

Query: 695 PHPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 516
           P+ S+ +T   TP++T++   T  +S+P   T  +  +P + T+ ++  +    +TPV +
Sbjct: 457 PYTSTPVT--STPLTTTNC--TTSTSIPYTSTPVT-STPLTTTNCTTSTSVPYTSTPVTS 511

Query: 515 STWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQ-PVSRSVSTTS 372
           S +     T VTS P   T  +  +  SVL  S+     P++ +  TTS
Sbjct: 512 SNYTISSSTPVTSTPV--TTTNCTTSTSVLYTSTPVTSTPLATTNCTTS 558


>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 857

 Score = 31.1 bits (67), Expect = 0.19
 Identities = 24/89 (26%), Positives = 33/89 (37%)
 Frame = -3

Query: 620 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 441
           S+P+ P     P   S     + P       P + S        VV   P +  RP++P 
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPV-----APEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567

Query: 440 KPSVLSNSSTGVQPVSRSVSTTSHPPWCP 354
            P  LS     V PV+  V +   PP  P
Sbjct: 568 VPEALSVPQPPVAPVAPEVPSVPQPPVAP 596



 Score = 25.4 bits (53), Expect = 9.4
 Identities = 23/90 (25%), Positives = 31/90 (34%)
 Frame = -3

Query: 620 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 441
           S+P+RP +   P   S       P       P +    +A       S P+    P  P 
Sbjct: 558 SVPQRPAVPVVPEALSVPQPPVAPVA--PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPE 615

Query: 440 KPSVLSNSSTGVQPVSRSVSTTSHPPWCPE 351
            PSV    +  V P + SV      P  PE
Sbjct: 616 VPSVPQRPAVPVVPEAPSVPQPPAAPVVPE 645


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 29.5 bits (63), Expect = 0.58
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 695  PHPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTR 543
            P P+++      P S +    T +SS+P  P  N+ PSP S + AS+ P R
Sbjct: 1230 PVPTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279


>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 534

 Score = 29.1 bits (62), Expect = 0.76
 Identities = 23/81 (28%), Positives = 41/81 (50%)
 Frame = -3

Query: 653 STSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSY 474
           STS  + T  SS   RP  +S  S    +H SS  ++  ++ PV ++ +     +  +S+
Sbjct: 377 STSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKS-SSAPVSSAFYHNSTSSRSSSH 435

Query: 473 PRM*TRPSLPSKPSVLSNSST 411
               +  SL SKP + ++SS+
Sbjct: 436 SSSHSLSSLSSKPILTASSSS 456


>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 3227

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 20/73 (27%), Positives = 34/73 (46%)
 Frame = +1

Query: 448 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMVGLLGRDDW 627
           S G   +LGY ++     A++V+A + V   HL+ G      D  + K       G D  
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK-------GLDML 459

Query: 628 RVRDQWEVDTGVR 666
             R Q+E++ G++
Sbjct: 460 VDRVQYELEAGLQ 472


>SPCC18.03 |||shuttle craft like transcriptional
           regulator|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1077

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -2

Query: 576 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 451
           +  ACFEP N    C   H K   C  L    +  KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401


>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
           subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 709

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = -3

Query: 284 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 111
           G+   TS TS T S       S++     S+P P   W P+        S+ TP+   V 
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207

Query: 110 EPKSTK 93
           EP+ TK
Sbjct: 208 EPRFTK 213


>SPAC9G1.08c |||phospholipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 241

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -3

Query: 725 FEIRRRSECGPHPSSRLTWCLTPVSTSHWSRTRQSSLPRRP 603
           FE R    C  +  SRL     P   + W+R  ++ +P  P
Sbjct: 171 FEKRLHCSCSEYEESRLRKTFKPFHLTCWNRDDKTDMPSSP 211


>SPBC2F12.13 |klp5|sot1|kinesin-like protein
           Klp5|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 883

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 690 VRSTFRAPSNLKEAVIEETICPMRRXXLGVG 782
           +RS+F+A S LKE  ++E    + +  LG+G
Sbjct: 596 LRSSFKASSLLKEGGMQELFSILEKWLLGIG 626


>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1158

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 626 QSSLPRRPTMNSFPSPRSQTHASSPPTR 543
           + SLPRRP+     +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765


>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 474

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 17/60 (28%), Positives = 33/60 (55%)
 Frame = -3

Query: 692 HPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 513
           H    +   LTP + S +S +  +S  +R ++N+ PS  + +H+SS  T   +  PV+++
Sbjct: 121 HRKRNVESILTPKNPSLFSSSNAAS--QRGSLNTAPSNFAYSHSSSLQTSASSRPPVLSN 178


>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 628

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
 Frame = -3

Query: 452 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 366
           +LP KPS+   +++S   V+P S   STTS+P
Sbjct: 5   TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36


>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
           Hus5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 157

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 471 WVRRHHGTAYSKPCTCHDGG 530
           W R H    Y+KPC   DGG
Sbjct: 16  WRRDHPFGFYAKPCKSSDGG 35


>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 665

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -3

Query: 455 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 360
           P  PS+P+++SN ST  G+Q V   V   +   W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564


>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1273

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 22/84 (26%), Positives = 36/84 (42%)
 Frame = -3

Query: 659 PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVT 480
           P+  SH S  +  S+ R    +       + H S  PT+  +AT +  S   AV     T
Sbjct: 253 PLDASHLSSQQLLSMYRDQVSHGVTPSTFRNHESFMPTQLVSATELSKSVDNAVLPIPPT 312

Query: 479 SYPRM*TRPSLPSKPSVLSNSSTG 408
           + P +   P   S P + S +++G
Sbjct: 313 TAPAV-VSPPASSFPLMSSAATSG 335


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,197,805
Number of Sequences: 5004
Number of extensions: 70124
Number of successful extensions: 269
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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