Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I09
         (789 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical p...    28   8.8  
AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical ...    28   8.8  

>Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical
           protein F56A8.6 protein.
          Length = 336

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -3

Query: 784 LQNPQLAYXLXQAQVIMRIVDPATAXTMXHPSXPCT 677
           +++PQ+AY + QA V+MRIVDP TA  + H +   T
Sbjct: 166 VEHPQIAYAVLQAAVVMRIVDPQTALGLLHRNKAAT 201



 Score = 38.3 bits (85), Expect = 0.006
 Identities = 15/42 (35%), Positives = 29/42 (69%)
 Frame = -1

Query: 228 DQEKAALIMQVLQLSDEQIALLPPEQRASILLLKEQIAKSTQ 103
           +Q+ A L+MQV+QLS+  + +LP   R  I+ L++Q+ ++ +
Sbjct: 295 EQQNAELLMQVMQLSEHDLQMLPAGDREKIIELRQQLKRNVK 336


>Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 632 IYHPIHHQHNHRYTIIPDRHPTSTTIPVRP 543
           I+H  HH H+H  T       T+TT  V P
Sbjct: 188 IHHQHHHHHHHTTTTPSTTTSTTTTTTVAP 217


>AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 632 IYHPIHHQHNHRYTIIPDRHPTSTTIPVRP 543
           I+H  HH H+H  T       T+TT  V P
Sbjct: 188 IHHQHHHHHHHTTTTPSTTTSTTTTTTVAP 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,555,311
Number of Sequences: 27780
Number of extensions: 318959
Number of successful extensions: 963
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)