Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I08
         (784 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0407 - 18675368-18675378,18676047-18676977,18677323-186773...    31   1.4  
11_01_0596 + 4755453-4755490,4755675-4756047,4757739-4758940,475...    30   2.4  
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497...    29   4.2  
01_01_1004 - 7944214-7944227,7944641-7945769                           29   5.5  
11_01_0749 - 6305087-6307522                                           28   7.3  
01_06_0347 + 28592552-28593502                                         28   7.3  
03_06_0572 + 34812203-34812278,34812485-34813768,34813973-348140...    28   9.6  
01_06_0782 + 31969677-31969767,31969863-31969960,31970059-319702...    28   9.6  

>02_03_0407 -
           18675368-18675378,18676047-18676977,18677323-18677376,
           18677809-18678039,18678112-18678319,18678405-18678433,
           18678638-18678706,18678832-18678893,18679056-18679133,
           18679243-18679315,18681135-18681260
          Length = 623

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 22/67 (32%), Positives = 30/67 (44%)
 Frame = +3

Query: 513 VKILGPYLPCRPPGPTSIDRPGPMVQWVPGPY*YTRAPLTAEAXPCXSRTPGPLXTSFSV 692
           +KI   +L   PP      RP  +V +  GP    RAP  A A P  SRT  PL    + 
Sbjct: 498 LKISELHLLPLPPANVDPVRPSGLVGY-SGPLVSKRAPTPARASPKASRTASPLPRPPAA 556

Query: 693 LPXRFAV 713
           L   +++
Sbjct: 557 LARSYSI 563


>11_01_0596 +
           4755453-4755490,4755675-4756047,4757739-4758940,
           4759026-4759392
          Length = 659

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3

Query: 525 GPYLPCRPPGPTSIDRPGPMVQWVPGPY*YTRAPLTAEAXP 647
           G Y+ C P G   +D P   VQ +   +   RAP T    P
Sbjct: 303 GAYVLCSPDGAACVDNPTAAVQMLYATFAARRAPETGAVPP 343


>09_04_0695 -
           19547101-19548010,19548089-19548587,19549461-19549728,
           19551025-19551687,19551849-19552060,19552203-19552593,
           19552659-19553107,19553454-19553790
          Length = 1242

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 526 GPICPVGPQDPRVLTVLG-RWYSGSPGPTNTPGL 624
           GP+ P+GP  P  +  LG    + SPG   +PGL
Sbjct: 511 GPVAPIGPVSPGPVAPLGPDGSAASPGLIASPGL 544


>01_01_1004 - 7944214-7944227,7944641-7945769
          Length = 380

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +3

Query: 543 RPPGPTSIDRPGPMV----QWVPGPY*YTRAPLTAEAXP 647
           R  GPT IDRPG       Q+VPG +    A  TA A P
Sbjct: 87  RAKGPTVIDRPGRQEFMWRQFVPGYFVLDAATATAVALP 125


>11_01_0749 - 6305087-6307522
          Length = 811

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 532 ICPVGPQDPRVLTVLGRWYSGSPGPTNTP 618
           +C VGP   R   V  RW+  S   TNTP
Sbjct: 93  LCAVGPSALRAGDVAMRWWDLSKNRTNTP 121


>01_06_0347 + 28592552-28593502
          Length = 316

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 544 GPQDPRVLTVLGRWYSGSPGPTNTPGLP*RPKP 642
           G +DP  LT LG  YS +P P  +P L   P P
Sbjct: 12  GGEDPLTLT-LGSIYSSAPTPPPSPSLVVAPTP 43


>03_06_0572 +
           34812203-34812278,34812485-34813768,34813973-34814049,
           34814299-34814646
          Length = 594

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = +3

Query: 528 PYLPCRPPGPTSIDRPGPMVQWVPGPY*YTRAPLTAEAXPCXSRTPG--PLXTSFSVLP 698
           P LP   P PT +  P P     P P+     P+TA   P     P   P  T+ + +P
Sbjct: 291 PNLPPLYPEPTPVTMPDPTTTTTPTPF---MNPVTAPTMPSPVTNPATTPAVTNPTTMP 346


>01_06_0782 +
           31969677-31969767,31969863-31969960,31970059-31970235,
           31970367-31970467,31970626-31970701,31970827-31970886,
           31970979-31971215,31971612-31971686,31971981-31972039,
           31972110-31972201,31972463-31972623,31972964-31973176
          Length = 479

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 139 FLKSTQYRE*KELSSIFLLNLFSYFCCLTLRWIY 240
           F+  +QY +  ++  I +L  FS F C+ L W Y
Sbjct: 196 FVVLSQYLKNVQIRDIPILERFSLFICIALVWAY 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,723,735
Number of Sequences: 37544
Number of extensions: 410755
Number of successful extensions: 976
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)