Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_I05
(813 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0664 + 5741111-5741113,5741491-5741658,5741741-5741864,574... 120 2e-27
03_06_0179 - 32171712-32171780,32171861-32171920,32172096-321721... 90 2e-18
11_06_0708 + 26475306-26478404 31 1.1
11_06_0707 + 26467214-26470309 31 1.1
11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166 31 1.1
11_06_0698 + 26385989-26389090 31 1.1
11_06_0696 + 26358713-26359779,26359826-26360110,26360177-263603... 31 1.1
11_01_0295 + 2217496-2218092,2218774-2218876,2219140-2219249,221... 30 1.9
04_03_0685 + 18687520-18687787,18688637-18688725,18689102-186891... 30 1.9
12_02_0488 + 19587337-19587648,19587739-19587798,19587876-195879... 29 4.4
05_07_0192 - 28314224-28316287 29 4.4
>08_01_0664 +
5741111-5741113,5741491-5741658,5741741-5741864,
5742078-5742169,5742254-5742352,5742476-5742589,
5743190-5743254,5743342-5743467,5743870-5743945,
5744502-5744594,5744944-5744994,5745084-5745182
Length = 369
Score = 120 bits (288), Expect = 2e-27
Identities = 61/104 (58%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
Frame = -2
Query: 581 ESKLLDMDPTERVSYLKEHGITS---ALDKIIVQGYKALQLEYFFTAGADEVKAWTIQKG 411
E L DM P E Y E+ I + KII G+ A+ L YFFTAG DEVK W I++
Sbjct: 239 ERLLADMPPDEAAKYCAENQIARQAIVIPKIIKTGFAAIHLIYFFTAGPDEVKCWQIRRQ 298
Query: 410 TKAPQAAGRIHTDFEKGFIMAEVMHFKDFKEEGTEAACKAAGKY 279
TKAPQAAG IHTDFE+GFI AEVM F D KE G+E+A KAAGKY
Sbjct: 299 TKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESAVKAAGKY 342
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 363 GFHHGRSHAFQGLQGRGYRSCV*SRRKI-QAXKVVITSFEDGDIIFFKFN 217
GF F L+ G S V + K Q K + +DGDIIFFKFN
Sbjct: 315 GFICAEVMKFDDLKELGSESAVKAAGKYRQEGKTYVV--QDGDIIFFKFN 362
>03_06_0179 -
32171712-32171780,32171861-32171920,32172096-32172166,
32172246-32172273,32172356-32172502,32172626-32172904,
32172949-32173011,32173137-32173247,32173605-32173658,
32173761-32173949,32174275-32174670
Length = 488
Score = 90.2 bits (214), Expect = 2e-18
Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = -2
Query: 584 VESKLLDMDPTERVSYLKEHGIT-SALDKIIVQGYKALQLEYFFTAGADEVKAWTIQKGT 408
VE++L ++ ERV YLK G+T S L ++ Y L L +FT G E KAWTI G
Sbjct: 365 VEAELAELPLEERVEYLKSLGVTESGLGNLVKATYDLLGLRTYFTTGDKETKAWTILAGM 424
Query: 407 KAPQAAGRIHTDFEKGFIMAEVMHFKDFKEEGTEAACKAAG 285
APQAAG IH+DF+KGFI AE + + DF G+ + G
Sbjct: 425 TAPQAAGVIHSDFQKGFIRAETVSYDDFVAAGSLGVAREKG 465
>11_06_0708 + 26475306-26478404
Length = 1032
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 397 KPQDVSTPTSRRVSSWPKSCISRTSRKRVPKLRVKPPENTGXQGRN 260
K ++ +PT R SSW C+ + PKLR PP+ G Q N
Sbjct: 888 KGEEAPSPTPR--SSWLLPCLKQLQLVECPKLRALPPQ-LGQQATN 930
>11_06_0707 + 26467214-26470309
Length = 1031
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 397 KPQDVSTPTSRRVSSWPKSCISRTSRKRVPKLRVKPPENTGXQGRN 260
K ++ +PT R SSW C+ + PKLR PP+ G Q N
Sbjct: 889 KGEEAPSPTPR--SSWLLPCLKQLQLVECPKLRALPPQ-LGQQATN 931
>11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166
Length = 940
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 397 KPQDVSTPTSRRVSSWPKSCISRTSRKRVPKLRVKPPENTGXQGRN 260
K ++ +PT R SSW C+ + PKLR PP+ G Q N
Sbjct: 704 KGEEAPSPTPR--SSWLLPCLKQLQLVECPKLRALPPQ-LGQQATN 746
>11_06_0698 + 26385989-26389090
Length = 1033
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -3
Query: 397 KPQDVSTPTSRRVSSWPKSCISRTSRKRVPKLRVKPPENTGXQGRN 260
K ++ +PT R SSW C+++ PKLR PP+ G Q N
Sbjct: 889 KGEEAPSPTPR--SSWLLPCLTKLDLVGCPKLRALPPQ-LGQQATN 931
>11_06_0696 +
26358713-26359779,26359826-26360110,26360177-26360356,
26360516-26360585,26361051-26361950
Length = 833
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -3
Query: 397 KPQDVSTPTSRRVSSWPKSCISRTSRKRVPKLRVKPPENTGXQGRN 260
K ++ +PT R SSW C+++ PKLR PP+ G Q N
Sbjct: 689 KGEEAPSPTPR--SSWLLPCLTKLDLVGCPKLRALPPQ-LGQQATN 731
>11_01_0295 +
2217496-2218092,2218774-2218876,2219140-2219249,
2219328-2219399,2219653-2219814,2220300-2220510,
2220613-2220948,2221050-2221162
Length = 567
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = -2
Query: 599 SILWSVESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFTAGADEVKAWTI 420
S+ SV L ++ T+ V + H I SA D+I++ Y L+ E +
Sbjct: 213 SLFTSVSENLNNVQTTDHVGTHENHSIKSASDRILIDFYHKLREESLTVISQYKKDLKES 272
Query: 419 QKGTKAPQAAGRIHTDFEK 363
QK + + T+ E+
Sbjct: 273 QKNSMLSDEKNEVMTETER 291
>04_03_0685 +
18687520-18687787,18688637-18688725,18689102-18689195,
18689237-18689304,18690300-18690383,18690458-18690745,
18691474-18691626
Length = 347
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 500 SCPMHSLCRVPSSKRHVQSDPCPA 571
S P+ LC +PSS+ H +DP P+
Sbjct: 51 SNPVRHLCGIPSSRCHAAADPAPS 74
>12_02_0488 +
19587337-19587648,19587739-19587798,19587876-19587941,
19588017-19588082,19588253-19588345
Length = 198
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/79 (24%), Positives = 32/79 (40%)
Frame = +3
Query: 417 LNCPGFDFICSSCEEILQLQSLISLNNDLVQCTRYAVFLQVRDTFSRIHVQQFRFNTPEN 596
+ C F+ IC+ E I LQSL ++D C + F + +F ++
Sbjct: 1 MECSSFEAICNESEMIAHLQSLFWSSSDADPCFGSSSFSLISSEGYDTMTTEFVNSSTNV 60
Query: 597 GIRGEPGSFLSIHSLSFGN 653
+ SF+S + GN
Sbjct: 61 CFDYQDDSFVSAEETTIGN 79
>05_07_0192 - 28314224-28316287
Length = 687
Score = 29.1 bits (62), Expect = 4.4
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Frame = +3
Query: 321 LEVLEMHDFGHDETLLEVGVDTSCGLRSLCAFLNCPGFDFICSSCEEILQLQSLISLNND 500
L +L + DFG +E +L V + +RS C G+ E +++ +
Sbjct: 101 LALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHM--- 157
Query: 501 LVQCTRYAVFLQVRDTFSRIHVQQFRFNTPENGI--RGEPGSFLSI 632
QC ++V D S +V F FN+ NG RG+ SI
Sbjct: 158 YCQCAHMDEAVKVFDNVSSFNV--FAFNSMINGFLDRGQMDGSTSI 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,682,986
Number of Sequences: 37544
Number of extensions: 359004
Number of successful extensions: 1108
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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