Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I05
         (813 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92773-1|CAB07131.1|  395|Caenorhabditis elegans Hypothetical pr...   154   6e-38
U21310-5|AAY86191.1|  148|Caenorhabditis elegans Hypothetical pr...    31   0.98 
Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical pr...    29   5.2  
U41994-3|AAO91712.1|  251|Caenorhabditis elegans Rnase h protein...    28   6.9  

>Z92773-1|CAB07131.1|  395|Caenorhabditis elegans Hypothetical
           protein W08E3.3 protein.
          Length = 395

 Score =  154 bits (374), Expect = 6e-38
 Identities = 75/101 (74%), Positives = 79/101 (78%)
 Frame = -2

Query: 581 ESKLLDMDPTERVSYLKEHGITSALDKIIVQGYKALQLEYFFTAGADEVKAWTIQKGTKA 402
           E KLLDM   ER  YLKE G+TS LDKI+  GYKALQLEYFFT+G DEVKAWTIQ GT A
Sbjct: 265 ELKLLDMPEDERQKYLKEQGVTSNLDKIVHTGYKALQLEYFFTSGEDEVKAWTIQVGTPA 324

Query: 401 PQAAGRIHTDFEKGFIMAEVMHFKDFKEEGTEAACKAAGKY 279
           P+AAGRIHTDFEKGFIMAEVM   D  E G EA CKA GKY
Sbjct: 325 PKAAGRIHTDFEKGFIMAEVMKVADLIELGDEAKCKAGGKY 365



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/39 (56%), Positives = 23/39 (58%)
 Frame = -3

Query: 691 LSEKDYIRXXXXXXXXXKEWIDKNDPGSPLIPFSGVLNL 575
           LSEKDYIR         K WID ND G+ LIPFSG   L
Sbjct: 228 LSEKDYIRKKNKWLPKIKAWIDTNDAGAVLIPFSGAFEL 266



 Score = 28.3 bits (60), Expect = 6.9
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = -1

Query: 249 EDGDIIFFKFNA 214
           +DGD+IFFKFNA
Sbjct: 375 QDGDVIFFKFNA 386


>U21310-5|AAY86191.1|  148|Caenorhabditis elegans Hypothetical
           protein F40H6.6 protein.
          Length = 148

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 2   FFFFFLQTSIKLYFIYLRKNVYYKYMLLLLNR 97
           F FFF     K YFI+ +  +Y  Y LLL+NR
Sbjct: 115 FSFFF-----KFYFIFYKIKIYMNYQLLLMNR 141


>Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 19/73 (26%), Positives = 30/73 (41%)
 Frame = -1

Query: 456 HSWSR*SQSLDNSERHKGSSSRRTYPHRLREGFHHGRSHAFQGLQGRGYRSCV*SRRKIQ 277
           HS    +Q    S+ H     RR   HR RE  HH R    +  + R  +  +    +++
Sbjct: 692 HSQQHPAQPAQPSQDHHEEHRRRLEEHRRREEEHHRRQE--EESRARALQQSLLHASQVE 749

Query: 276 AXKVVITSFEDGD 238
           + +V      DGD
Sbjct: 750 STEVTFQDEYDGD 762


>Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 19/73 (26%), Positives = 30/73 (41%)
 Frame = -1

Query: 456 HSWSR*SQSLDNSERHKGSSSRRTYPHRLREGFHHGRSHAFQGLQGRGYRSCV*SRRKIQ 277
           HS    +Q    S+ H     RR   HR RE  HH R    +  + R  +  +    +++
Sbjct: 692 HSQQHPAQPAQPSQDHHEEHRRRLEEHRRREEEHHRRQE--EESRARALQQSLLHASQVE 749

Query: 276 AXKVVITSFEDGD 238
           + +V      DGD
Sbjct: 750 STEVTFQDEYDGD 762


>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
           protein T01D3.3b protein.
          Length = 1011

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 479 PYILEQ*SCPMHSLCRVPSSKRHVQSDPCPAI 574
           P+ILE    P+HS C +PSS   + + P P I
Sbjct: 396 PFILENADDPLHSRCILPSSCPEIPT-PAPEI 426


>Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical
           protein T01D3.3a protein.
          Length = 802

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 479 PYILEQ*SCPMHSLCRVPSSKRHVQSDPCPAI 574
           P+ILE    P+HS C +PSS   + + P P I
Sbjct: 187 PFILENADDPLHSRCILPSSCPEIPT-PAPEI 217


>U41994-3|AAO91712.1|  251|Caenorhabditis elegans Rnase h protein
           1.0, isoform c protein.
          Length = 251

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 346 KSCISRTSRKRVPKLRVKPPENTGXQGRNYVVRGWR 239
           +  I +   KR+PK+ +K   N   Q  N  + GW+
Sbjct: 154 QKAIEKAIEKRLPKVVIKTDSNLLVQSMNIWIHGWK 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,407,692
Number of Sequences: 27780
Number of extensions: 310039
Number of successful extensions: 953
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)