Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_I04
(785 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif prote... 64 4e-10
BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif prote... 64 4e-10
AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif prot... 64 4e-10
AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif prote... 64 4e-10
AF393214-1|AAM73682.1| 932|Homo sapiens swan protein. 64 4e-10
AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein. 64 4e-10
AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein. 64 4e-10
AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein. 64 4e-10
AB015336-1|BAA34794.1| 376|Homo sapiens HRIHFB2091 protein. 64 4e-10
BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein. 43 0.001
U07231-1|AAC95399.1| 424|Homo sapiens G-rich sequence factor-1 ... 42 0.003
AK127161-1|BAC86863.1| 447|Homo sapiens protein ( Homo sapiens ... 42 0.003
AK090755-1|BAC03513.1| 415|Homo sapiens protein ( Homo sapiens ... 42 0.003
L22009-1|AAA91346.1| 449|Homo sapiens hnRNP H protein. 40 0.010
CR456778-1|CAG33059.1| 449|Homo sapiens HNRPH1 protein. 40 0.010
BC001348-1|AAH01348.1| 449|Homo sapiens HNRPH1 protein protein. 40 0.010
U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein. 39 0.018
BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear r... 39 0.018
BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear r... 39 0.018
BC112043-1|AAI12044.1| 392|Homo sapiens RBM35A protein protein. 39 0.018
BC099916-1|AAH99916.2| 677|Homo sapiens RNA binding motif prote... 39 0.018
BC067098-1|AAH67098.2| 681|Homo sapiens RNA binding motif prote... 39 0.018
BC019932-1|AAH19932.1| 656|Homo sapiens RBM35A protein protein. 39 0.018
AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear r... 39 0.018
L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein. 38 0.041
BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein. 38 0.041
BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein. 38 0.041
BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein. 38 0.041
BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear r... 38 0.041
BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear r... 38 0.041
AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear r... 38 0.041
BC030146-1|AAH30146.1| 717|Homo sapiens RNA binding motif prote... 38 0.054
AK025571-1|BAB15173.1| 727|Homo sapiens osaminidase mRNA. prot... 38 0.054
AK000178-1|BAA90992.1| 358|Homo sapiens protein ( Homo sapiens ... 38 0.054
L32610-1|AAD45179.1| 346|Homo sapiens ribonucleoprotein protein. 36 0.22
BC039824-1|AAH39824.1| 331|Homo sapiens heterogeneous nuclear r... 36 0.22
AK223441-1|BAD97161.1| 346|Homo sapiens heterogeneous nuclear r... 36 0.22
AF132361-1|AAF68849.1| 331|Homo sapiens hnRNP 2H9A protein. 36 0.22
AF132360-2|AAF68847.1| 331|Homo sapiens hnRNP 2H9A protein. 36 0.22
AF132360-1|AAF68843.1| 346|Homo sapiens hnRNP 2H9 protein. 36 0.22
BC004511-1|AAH04511.2| 207|Homo sapiens HNRPH3 protein protein. 34 0.67
AL117395-1|CAB55897.1| 215|Homo sapiens hypothetical protein pr... 34 0.67
AF132364-1|AAF68852.1| 139|Homo sapiens hnRNP 2H9E protein. 34 0.67
AF132363-1|AAF68851.1| 145|Homo sapiens hnRNP 2H9D protein. 34 0.67
AF132362-1|AAF68850.1| 297|Homo sapiens hnRNP 2H9B protein. 34 0.67
AF132360-6|AAF68846.1| 139|Homo sapiens hnRNP 2H9E protein. 34 0.67
AF132360-5|AAF68845.1| 145|Homo sapiens hnRNP 2H9D protein. 34 0.67
AF132360-4|AAF68848.1| 215|Homo sapiens hnRNP 2H9C protein. 34 0.67
AF132360-3|AAF68844.1| 297|Homo sapiens hnRNP 2H9B protein. 34 0.67
>BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif protein 12
protein.
Length = 932
Score = 64.5 bits (150), Expect = 4e-10
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -1
Query: 509 GAPG-CVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDA 333
G PG V+ ++N+PF +IDEIL FF +++ V +YNE+G PTG+A VAF + +A
Sbjct: 851 GKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEA 910
Query: 332 TRAVKTHHLDTIHERRITL 276
T AV + I R++ L
Sbjct: 911 TAAVIDLNDRPIGSRKVKL 929
Score = 39.9 bits (89), Expect = 0.010
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V ++ +PF A ++ FF + ++ D + Y G+ TG+ V FR D A+
Sbjct: 429 GFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL 488
Query: 320 KTH 312
H
Sbjct: 489 CRH 491
Score = 33.9 bits (74), Expect = 0.67
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -1
Query: 479 NVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
N+PF T ++LQF + + V + GQ G A V F+ DA ++ + H
Sbjct: 550 NIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLH 605
>BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif protein 12
protein.
Length = 932
Score = 64.5 bits (150), Expect = 4e-10
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -1
Query: 509 GAPG-CVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDA 333
G PG V+ ++N+PF +IDEIL FF +++ V +YNE+G PTG+A VAF + +A
Sbjct: 851 GKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEA 910
Query: 332 TRAVKTHHLDTIHERRITL 276
T AV + I R++ L
Sbjct: 911 TAAVIDLNDRPIGSRKVKL 929
Score = 39.9 bits (89), Expect = 0.010
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V ++ +PF A ++ FF + ++ D + Y G+ TG+ V FR D A+
Sbjct: 429 GFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL 488
Query: 320 KTH 312
H
Sbjct: 489 CRH 491
Score = 33.9 bits (74), Expect = 0.67
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -1
Query: 479 NVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
N+PF T ++LQF + + V + GQ G A V F+ DA ++ + H
Sbjct: 550 NIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLH 605
>AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 64.5 bits (150), Expect = 4e-10
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -1
Query: 509 GAPG-CVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDA 333
G PG V+ ++N+PF +IDEIL FF +++ V +YNE+G PTG+A VAF + +A
Sbjct: 851 GKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEA 910
Query: 332 TRAVKTHHLDTIHERRITL 276
T AV + I R++ L
Sbjct: 911 TAAVIDLNDRPIGSRKVKL 929
Score = 39.9 bits (89), Expect = 0.010
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V ++ +PF A ++ FF + ++ D + Y G+ TG+ V FR D A+
Sbjct: 429 GFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL 488
Query: 320 KTH 312
H
Sbjct: 489 CRH 491
Score = 33.9 bits (74), Expect = 0.67
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -1
Query: 479 NVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
N+PF T ++LQF + + V + GQ G A V F+ DA ++ + H
Sbjct: 550 NIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLH 605
>AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif protein 12
protein.
Length = 932
Score = 64.5 bits (150), Expect = 4e-10
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -1
Query: 509 GAPG-CVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDA 333
G PG V+ ++N+PF +IDEIL FF +++ V +YNE+G PTG+A VAF + +A
Sbjct: 851 GKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEA 910
Query: 332 TRAVKTHHLDTIHERRITL 276
T AV + I R++ L
Sbjct: 911 TAAVIDLNDRPIGSRKVKL 929
Score = 39.9 bits (89), Expect = 0.010
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V ++ +PF A ++ FF + ++ D + Y G+ TG+ V FR D A+
Sbjct: 429 GFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL 488
Query: 320 KTH 312
H
Sbjct: 489 CRH 491
Score = 33.5 bits (73), Expect = 0.88
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -1
Query: 479 NVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
N+PF T ++LQF + + V + GQ G A V F+ DA + + H
Sbjct: 550 NIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKTERLH 605
>AF393214-1|AAM73682.1| 932|Homo sapiens swan protein.
Length = 932
Score = 64.5 bits (150), Expect = 4e-10
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -1
Query: 509 GAPG-CVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDA 333
G PG V+ ++N+PF +IDEIL FF +++ V +YNE+G PTG+A VAF + +A
Sbjct: 851 GKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEA 910
Query: 332 TRAVKTHHLDTIHERRITL 276
T AV + I R++ L
Sbjct: 911 TAAVIDLNDRPIGSRKVKL 929
Score = 39.9 bits (89), Expect = 0.010
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V ++ +PF A ++ FF + ++ D + Y G+ TG+ V FR D A+
Sbjct: 429 GFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL 488
Query: 320 KTH 312
H
Sbjct: 489 CRH 491
Score = 33.9 bits (74), Expect = 0.67
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -1
Query: 479 NVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
N+PF T ++LQF + + V + GQ G A V F+ DA ++ + H
Sbjct: 550 NIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLH 605
>AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 64.5 bits (150), Expect = 4e-10
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -1
Query: 509 GAPG-CVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDA 333
G PG V+ ++N+PF +IDEIL FF +++ V +YNE+G PTG+A VAF + +A
Sbjct: 851 GKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEA 910
Query: 332 TRAVKTHHLDTIHERRITL 276
T AV + I R++ L
Sbjct: 911 TAAVIDLNDRPIGSRKVKL 929
Score = 39.9 bits (89), Expect = 0.010
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V ++ +PF A ++ FF + ++ D + Y G+ TG+ V FR D A+
Sbjct: 429 GFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL 488
Query: 320 KTH 312
H
Sbjct: 489 CRH 491
Score = 33.9 bits (74), Expect = 0.67
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -1
Query: 479 NVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
N+PF T ++LQF + + V + GQ G A V F+ DA ++ + H
Sbjct: 550 NIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLH 605
>AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 64.5 bits (150), Expect = 4e-10
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -1
Query: 509 GAPG-CVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDA 333
G PG V+ ++N+PF +IDEIL FF +++ V +YNE+G PTG+A VAF + +A
Sbjct: 851 GKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEA 910
Query: 332 TRAVKTHHLDTIHERRITL 276
T AV + I R++ L
Sbjct: 911 TAAVIDLNDRPIGSRKVKL 929
Score = 39.9 bits (89), Expect = 0.010
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V ++ +PF A ++ FF + ++ D + Y G+ TG+ V FR D A+
Sbjct: 429 GFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL 488
Query: 320 KTH 312
H
Sbjct: 489 CRH 491
Score = 33.9 bits (74), Expect = 0.67
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -1
Query: 479 NVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
N+PF T ++LQF + + V + GQ G A V F+ DA ++ + H
Sbjct: 550 NIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLH 605
>AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein.
Length = 952
Score = 64.5 bits (150), Expect = 4e-10
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -1
Query: 509 GAPG-CVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDA 333
G PG V+ ++N+PF +IDEIL FF +++ V +YNE+G PTG+A VAF + +A
Sbjct: 871 GKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEA 930
Query: 332 TRAVKTHHLDTIHERRITL 276
T AV + I R++ L
Sbjct: 931 TAAVIDLNDRPIGSRKVKL 949
Score = 39.9 bits (89), Expect = 0.010
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V ++ +PF A ++ FF + ++ D + Y G+ TG+ V FR D A+
Sbjct: 449 GFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL 508
Query: 320 KTH 312
H
Sbjct: 509 CRH 511
Score = 33.9 bits (74), Expect = 0.67
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -1
Query: 479 NVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
N+PF T ++LQF + + V + GQ G A V F+ DA ++ + H
Sbjct: 570 NIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLH 625
>AB015336-1|BAA34794.1| 376|Homo sapiens HRIHFB2091 protein.
Length = 376
Score = 64.5 bits (150), Expect = 4e-10
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -1
Query: 509 GAPG-CVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDA 333
G PG V+ ++N+PF +IDEIL FF +++ V +YNE+G PTG+A VAF + +A
Sbjct: 295 GKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEA 354
Query: 332 TRAVKTHHLDTIHERRITL 276
T AV + I R++ L
Sbjct: 355 TAAVIDLNDRPIGSRKVKL 373
>BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein.
Length = 765
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRA 324
+ + N PF T E+ +FF++F L+ DD+ Y+++G G+A V F++ A +A
Sbjct: 402 IYIRNFPFDVTKVEVQKFFADFLLAEDDIYLLYDDKGVGLGEALVKFKSEEQAMKA 457
Score = 30.7 bits (66), Expect = 6.2
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -1
Query: 485 MENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
+ +P+ D++ FFS L D VI + G+ GDA V F + DA+ +K H
Sbjct: 159 LRGLPYLVNEDDVRVFFSG--LCVDGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCH 214
>U07231-1|AAC95399.1| 424|Homo sapiens G-rich sequence factor-1
protein.
Length = 424
Score = 41.5 bits (93), Expect = 0.003
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = -1
Query: 527 PALQDFGAPGCV--VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVA 354
P DFG + V M +PF+A +I+ FF+ L + Y+ G+ TG+A V
Sbjct: 333 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFA--PLKPVRITMEYSSSGKATGEADVH 390
Query: 353 FRTPFDATRAVKTHHLDTIHERRITL 276
F T DA A+ +H R I L
Sbjct: 391 FETHEDAVAAMLKDR-SHVHHRYIEL 415
>AK127161-1|BAC86863.1| 447|Homo sapiens protein ( Homo sapiens
cDNA FLJ45225 fis, clone BRCAN2020331, highly similar
to G-rich sequence factor-1. ).
Length = 447
Score = 41.5 bits (93), Expect = 0.003
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = -1
Query: 527 PALQDFGAPGCV--VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVA 354
P DFG + V M +PF+A +I+ FF+ L + Y+ G+ TG+A V
Sbjct: 356 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFA--PLKPVRITMEYSSSGKATGEADVH 413
Query: 353 FRTPFDATRAVKTHHLDTIHERRITL 276
F T DA A+ +H R I L
Sbjct: 414 FETHEDAVAAMLKDR-SHVHHRYIEL 438
>AK090755-1|BAC03513.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ33436 fis, clone BRACE2021478, highly similar to
G-RICH SEQUENCE FACTOR-1. ).
Length = 415
Score = 41.5 bits (93), Expect = 0.003
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = -1
Query: 527 PALQDFGAPGCV--VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVA 354
P DFG + V M +PF+A +I+ FF+ L + Y+ G+ TG+A V
Sbjct: 324 PEAADFGTTSSLHFVHMRGLPFQANAQDIINFFA--PLKPVRITMEYSSSGKATGEADVH 381
Query: 353 FRTPFDATRAVKTHHLDTIHERRITL 276
F T DA A+ +H R I L
Sbjct: 382 FETHEDAVAAMLKDR-SHVHHRYIEL 406
>L22009-1|AAA91346.1| 449|Homo sapiens hnRNP H protein.
Length = 449
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFFS E+ + + + +G+ TG+A V F + A +A+K H
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Score = 35.9 bits (79), Expect = 0.17
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 509 GAPGCVVSMENVPFRATIDEILQFFSEFELSH--DDVIRRYNERGQPTGDARVAFRTPFD 336
G G VV + +P+ + DE+ +FFS+ ++ + + Y G+P+G+A V + +
Sbjct: 7 GGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDE 66
Query: 335 ATRAVK 318
A+K
Sbjct: 67 VKLALK 72
Score = 35.9 bits (79), Expect = 0.17
Identities = 33/104 (31%), Positives = 46/104 (44%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P+RAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 288 GHCVHMRGLPYRATENDIYNFFS--PLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAM 345
Query: 320 KTHHLDTIHERRITLNIL*RPRSSGEASEDLGPSFDIESVPNAS 189
+ H R + L + +SG A E + S AS
Sbjct: 346 SKDKANMQH-RYVELFLNSTAGASGGAYEHRYVELFLNSTAGAS 388
>CR456778-1|CAG33059.1| 449|Homo sapiens HNRPH1 protein.
Length = 449
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFFS E+ + + + +G+ TG+A V F + A +A+K H
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Score = 35.9 bits (79), Expect = 0.17
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 509 GAPGCVVSMENVPFRATIDEILQFFSEFELSH--DDVIRRYNERGQPTGDARVAFRTPFD 336
G G VV + +P+ + DE+ +FFS+ ++ + + Y G+P+G+A V + +
Sbjct: 7 GGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDE 66
Query: 335 ATRAVK 318
A+K
Sbjct: 67 VKLALK 72
Score = 35.9 bits (79), Expect = 0.17
Identities = 33/104 (31%), Positives = 46/104 (44%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P+RAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 288 GHCVHMRGLPYRATENDIYNFFS--PLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAM 345
Query: 320 KTHHLDTIHERRITLNIL*RPRSSGEASEDLGPSFDIESVPNAS 189
+ H R + L + +SG A E + S AS
Sbjct: 346 SKDKANMQH-RYVELFLNSTAGASGGAYEHRYVELFLNSTAGAS 388
>BC001348-1|AAH01348.1| 449|Homo sapiens HNRPH1 protein protein.
Length = 449
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFFS E+ + + + +G+ TG+A V F + A +A+K H
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Score = 35.9 bits (79), Expect = 0.17
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 509 GAPGCVVSMENVPFRATIDEILQFFSEFELSH--DDVIRRYNERGQPTGDARVAFRTPFD 336
G G VV + +P+ + DE+ +FFS+ ++ + + Y G+P+G+A V + +
Sbjct: 7 GGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDE 66
Query: 335 ATRAVK 318
A+K
Sbjct: 67 VKLALK 72
Score = 35.9 bits (79), Expect = 0.17
Identities = 33/104 (31%), Positives = 46/104 (44%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P+RAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 288 GHCVHMRGLPYRATENDIYNFFS--PLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAM 345
Query: 320 KTHHLDTIHERRITLNIL*RPRSSGEASEDLGPSFDIESVPNAS 189
+ H R + L + +SG A E + S AS
Sbjct: 346 SKDKANMQH-RYVELFLNSTAGASGGAYEHRYVELFLNSTAGAS 388
>U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein.
Length = 449
Score = 39.1 bits (87), Expect = 0.018
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFFS E+ + + + +G+ TG+A V F + A +A+K H
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Score = 37.5 bits (83), Expect = 0.054
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 509 GAPGCVVSMENVPFRATIDEILQFFSEFELSHDDVIRR--YNERGQPTGDARVAFRTPFD 336
G G VV + +P+ + DE+++FFS+ ++ + R Y G+P+G+A V + +
Sbjct: 7 GREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 335 ATRAVK 318
A+K
Sbjct: 67 VKLALK 72
Score = 34.3 bits (75), Expect = 0.51
Identities = 32/104 (30%), Positives = 46/104 (44%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P+RAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 288 GHCVHMRGLPYRATENDIYNFFS--PLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAM 345
Query: 320 KTHHLDTIHERRITLNIL*RPRSSGEASEDLGPSFDIESVPNAS 189
+ H R + L + +SG A + + S AS
Sbjct: 346 AKDKANMQH-RYVELFLNSTAGTSGGAYDHSYVELFLNSTAGAS 388
>BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 39.1 bits (87), Expect = 0.018
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFFS E+ + + + +G+ TG+A V F + A +A+K H
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Score = 37.5 bits (83), Expect = 0.054
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 509 GAPGCVVSMENVPFRATIDEILQFFSEFELSHDDVIRR--YNERGQPTGDARVAFRTPFD 336
G G VV + +P+ + DE+++FFS+ ++ + R Y G+P+G+A V + +
Sbjct: 7 GREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 335 ATRAVK 318
A+K
Sbjct: 67 VKLALK 72
Score = 34.3 bits (75), Expect = 0.51
Identities = 32/104 (30%), Positives = 46/104 (44%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P+RAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 288 GHCVHMRGLPYRATENDIYNFFS--PLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAM 345
Query: 320 KTHHLDTIHERRITLNIL*RPRSSGEASEDLGPSFDIESVPNAS 189
+ H R + L + +SG A + + S AS
Sbjct: 346 AKDKANMQH-RYVELFLNSTAGTSGGAYDHSYVELFLNSTAGAS 388
>BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 39.1 bits (87), Expect = 0.018
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFFS E+ + + + +G+ TG+A V F + A +A+K H
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Score = 37.5 bits (83), Expect = 0.054
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 509 GAPGCVVSMENVPFRATIDEILQFFSEFELSHDDVIRR--YNERGQPTGDARVAFRTPFD 336
G G VV + +P+ + DE+++FFS+ ++ + R Y G+P+G+A V + +
Sbjct: 7 GREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 335 ATRAVK 318
A+K
Sbjct: 67 VKLALK 72
Score = 34.3 bits (75), Expect = 0.51
Identities = 32/104 (30%), Positives = 46/104 (44%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P+RAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 288 GHCVHMRGLPYRATENDIYNFFS--PLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAM 345
Query: 320 KTHHLDTIHERRITLNIL*RPRSSGEASEDLGPSFDIESVPNAS 189
+ H R + L + +SG A + + S AS
Sbjct: 346 AKDKANMQH-RYVELFLNSTAGTSGGAYDHSYVELFLNSTAGAS 388
>BC112043-1|AAI12044.1| 392|Homo sapiens RBM35A protein protein.
Length = 392
Score = 39.1 bits (87), Expect = 0.018
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEF--ELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVK 318
+ + +P+ ATI++IL F EF ++ V N +G+P+GDA + ++ A A +
Sbjct: 294 IRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQ 353
Query: 317 THHLDTIHERRI 282
H + +R +
Sbjct: 354 KCHKKNMKDRYV 365
Score = 36.7 bits (81), Expect = 0.095
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -1
Query: 494 VVSMENVPFRATIDEILQFFSE---FELSHDDVIRRYNERGQPTGDARVAFRTPFDATRA 324
+V M +PF AT +E++ FF + + ++ G+PTGDA V F A A
Sbjct: 174 IVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA 233
Query: 323 VKTHHLDTIHERRITL 276
++ H D + +R I L
Sbjct: 234 LRKHK-DLLGKRYIEL 248
>BC099916-1|AAH99916.2| 677|Homo sapiens RNA binding motif protein
35A protein.
Length = 677
Score = 39.1 bits (87), Expect = 0.018
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEF--ELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVK 318
+ + +P+ ATI++IL F EF ++ V N +G+P+GDA + ++ A A +
Sbjct: 447 IRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQ 506
Query: 317 THHLDTIHERRI 282
H + +R +
Sbjct: 507 KCHKKNMKDRYV 518
Score = 36.7 bits (81), Expect = 0.095
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -1
Query: 494 VVSMENVPFRATIDEILQFFSE---FELSHDDVIRRYNERGQPTGDARVAFRTPFDATRA 324
+V M +PF AT +E++ FF + + ++ G+PTGDA V F A A
Sbjct: 327 IVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA 386
Query: 323 VKTHHLDTIHERRITL 276
++ H D + +R I L
Sbjct: 387 LRKHK-DLLGKRYIEL 401
>BC067098-1|AAH67098.2| 681|Homo sapiens RNA binding motif protein
35A protein.
Length = 681
Score = 39.1 bits (87), Expect = 0.018
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEF--ELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVK 318
+ + +P+ ATI++IL F EF ++ V N +G+P+GDA + ++ A A +
Sbjct: 447 IRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQ 506
Query: 317 THHLDTIHERRI 282
H + +R +
Sbjct: 507 KCHKKNMKDRYV 518
Score = 36.7 bits (81), Expect = 0.095
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -1
Query: 494 VVSMENVPFRATIDEILQFFSE---FELSHDDVIRRYNERGQPTGDARVAFRTPFDATRA 324
+V M +PF AT +E++ FF + + ++ G+PTGDA V F A A
Sbjct: 327 IVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA 386
Query: 323 VKTHHLDTIHERRITL 276
++ H D + +R I L
Sbjct: 387 LRKHK-DLLGKRYIEL 401
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -1
Query: 503 PGCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQ 378
PG VV M+ + + + EIL FF ++ + +D + N++ +
Sbjct: 631 PGTVVRMQGLAYNTGVKEILNFFQGYQYATEDGLIHTNDQAR 672
>BC019932-1|AAH19932.1| 656|Homo sapiens RBM35A protein protein.
Length = 656
Score = 39.1 bits (87), Expect = 0.018
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEF--ELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVK 318
+ + +P+ ATI++IL F EF ++ V N +G+P+GDA + ++ A A +
Sbjct: 495 IRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQ 554
Query: 317 THHLDTIHERRI 282
H + +R +
Sbjct: 555 KCHKKNMKDRYV 566
Score = 36.7 bits (81), Expect = 0.095
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -1
Query: 494 VVSMENVPFRATIDEILQFFSE---FELSHDDVIRRYNERGQPTGDARVAFRTPFDATRA 324
+V M +PF AT +E++ FF + + ++ G+PTGDA V F A A
Sbjct: 375 IVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA 434
Query: 323 VKTHHLDTIHERRITL 276
++ H D + +R I L
Sbjct: 435 LRKHK-DLLGKRYIEL 449
>AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 39.1 bits (87), Expect = 0.018
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFFS E+ + + + +G+ TG+A V F + A +A+K H
Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172
Score = 37.5 bits (83), Expect = 0.054
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 509 GAPGCVVSMENVPFRATIDEILQFFSEFELSHDDVIRR--YNERGQPTGDARVAFRTPFD 336
G G VV + +P+ + DE+++FFS+ ++ + R Y G+P+G+A V + +
Sbjct: 7 GREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEE 66
Query: 335 ATRAVK 318
A+K
Sbjct: 67 VKLALK 72
Score = 34.3 bits (75), Expect = 0.51
Identities = 32/104 (30%), Positives = 46/104 (44%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P+RAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 288 GHCVHMRGLPYRATENDIYNFFS--PLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAM 345
Query: 320 KTHHLDTIHERRITLNIL*RPRSSGEASEDLGPSFDIESVPNAS 189
+ H R + L + +SG A + + S AS
Sbjct: 346 AKDKANMQH-RYVELFLNSTAGTSGGAYDHSYVELFLNSTAGAS 388
>L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein.
Length = 415
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF T +EI+QFFS E+ + + + G+ TG+A V F + A +A+ H
Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 172
Score = 31.9 bits (69), Expect = 2.7
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P++AT ++I FFS L+ V G+ TG+A V F T +A A+
Sbjct: 288 GHCVHMRGLPYKATENDIYNFFS--PLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAM 345
Query: 320 KTHHLDTIH 294
+ H
Sbjct: 346 SKDRANMQH 354
>BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF T +EI+QFFS E+ + + + G+ TG+A V F + A +A+ H
Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 172
Score = 31.9 bits (69), Expect = 2.7
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P++AT ++I FFS L+ V G+ TG+A V F T +A A+
Sbjct: 288 GHCVHMRGLPYKATENDIYNFFS--PLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAM 345
Query: 320 KTHHLDTIH 294
+ H
Sbjct: 346 SKDRANMQH 354
>BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF T +EI+QFFS E+ + + + G+ TG+A V F + A +A+ H
Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 172
Score = 31.9 bits (69), Expect = 2.7
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P++AT ++I FFS L+ V G+ TG+A V F T +A A+
Sbjct: 288 GHCVHMRGLPYKATENDIYNFFS--PLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAM 345
Query: 320 KTHHLDTIH 294
+ H
Sbjct: 346 SKDRANMQH 354
>BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF T +EI+QFFS E+ + + + G+ TG+A V F + A +A+ H
Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 172
Score = 31.9 bits (69), Expect = 2.7
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P++AT ++I FFS L+ V G+ TG+A V F T +A A+
Sbjct: 288 GHCVHMRGLPYKATENDIYNFFS--PLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAM 345
Query: 320 KTHHLDTIH 294
+ H
Sbjct: 346 SKDRANMQH 354
>BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF T +EI+QFFS E+ + + + G+ TG+A V F + A +A+ H
Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 172
Score = 31.9 bits (69), Expect = 2.7
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P++AT ++I FFS L+ V G+ TG+A V F T +A A+
Sbjct: 288 GHCVHMRGLPYKATENDIYNFFS--PLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAM 345
Query: 320 KTHHLDTIH 294
+ H
Sbjct: 346 SKDRANMQH 354
>BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF T +EI+QFFS E+ + + + G+ TG+A V F + A +A+ H
Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 172
Score = 31.9 bits (69), Expect = 2.7
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P++AT ++I FFS L+ V G+ TG+A V F T +A A+
Sbjct: 288 GHCVHMRGLPYKATENDIYNFFS--PLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAM 345
Query: 320 KTHHLDTIH 294
+ H
Sbjct: 346 SKDRANMQH 354
>AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 37.9 bits (84), Expect = 0.041
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF T +EI+QFFS E+ + + + G+ TG+A V F + A +A+ H
Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 172
Score = 31.9 bits (69), Expect = 2.7
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +P++AT ++I FFS L+ V G+ TG+A V F T +A A+
Sbjct: 288 GHCVHMRGLPYKATENDIYNFFS--PLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAM 345
Query: 320 KTHHLDTIH 294
+ H
Sbjct: 346 SKDRANMQH 354
>BC030146-1|AAH30146.1| 717|Homo sapiens RNA binding motif protein
35B protein.
Length = 717
Score = 37.5 bits (83), Expect = 0.054
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEF--ELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVK 318
V + +P+ ATI++IL F E ++ V N++G+P+GDA + + A A +
Sbjct: 467 VRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQ 526
Query: 317 THHLDTIHERRI 282
H + ER +
Sbjct: 527 RCHKKVMKERYV 538
>AK025571-1|BAB15173.1| 727|Homo sapiens osaminidase mRNA.
protein.
Length = 727
Score = 37.5 bits (83), Expect = 0.054
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEF--ELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVK 318
V + +P+ ATI++IL F E ++ V N++G+P+GDA + + A A +
Sbjct: 477 VRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQ 536
Query: 317 THHLDTIHERRI 282
H + ER +
Sbjct: 537 RCHKKVMKERYV 548
>AK000178-1|BAA90992.1| 358|Homo sapiens protein ( Homo sapiens
cDNA FLJ20171 fis, clone COL09761. ).
Length = 358
Score = 37.5 bits (83), Expect = 0.054
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEF--ELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVK 318
+ + +P+ ATI++IL F EF ++ V N +G+P+GDA + ++ A A +
Sbjct: 287 IRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQ 346
Query: 317 THHLDTIHERRI 282
H HE +I
Sbjct: 347 KCHKKK-HEGQI 357
Score = 36.7 bits (81), Expect = 0.095
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -1
Query: 494 VVSMENVPFRATIDEILQFFSE---FELSHDDVIRRYNERGQPTGDARVAFRTPFDATRA 324
+V M +PF AT +E++ FF + + ++ G+PTGDA V F A A
Sbjct: 167 IVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNA 226
Query: 323 VKTHHLDTIHERRITL 276
++ H D + +R I L
Sbjct: 227 LRKHK-DLLGKRYIEL 241
>L32610-1|AAD45179.1| 346|Homo sapiens ribonucleoprotein protein.
Length = 346
Score = 35.5 bits (78), Expect = 0.22
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFF E+ + + + +G+ TG+A V F + A A+ H
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKH 77
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 194 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 251
>BC039824-1|AAH39824.1| 331|Homo sapiens heterogeneous nuclear
ribonucleoprotein H3 (2H9) protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.22
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFF E+ + + + +G+ TG+A V F + A A+ H
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKH 77
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 179 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 236
>AK223441-1|BAD97161.1| 346|Homo sapiens heterogeneous nuclear
ribonucleoprotein H3 isoform a variant protein.
Length = 346
Score = 35.5 bits (78), Expect = 0.22
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFF E+ + + + +G+ TG+A V F + A A+ H
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKH 77
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 194 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 251
>AF132361-1|AAF68849.1| 331|Homo sapiens hnRNP 2H9A protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.22
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFF E+ + + + +G+ TG+A V F + A A+ H
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKH 77
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 179 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 236
>AF132360-2|AAF68847.1| 331|Homo sapiens hnRNP 2H9A protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.22
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFF E+ + + + +G+ TG+A V F + A A+ H
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKH 77
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 179 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 236
>AF132360-1|AAF68843.1| 346|Homo sapiens hnRNP 2H9 protein.
Length = 346
Score = 35.5 bits (78), Expect = 0.22
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -1
Query: 491 VSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTH 312
V + +PF + +EI+QFF E+ + + + +G+ TG+A V F + A A+ H
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKH 77
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 194 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 251
>BC004511-1|AAH04511.2| 207|Homo sapiens HNRPH3 protein protein.
Length = 207
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 55 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 112
>AL117395-1|CAB55897.1| 215|Homo sapiens hypothetical protein
protein.
Length = 215
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 63 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 120
>AF132364-1|AAF68852.1| 139|Homo sapiens hnRNP 2H9E protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 57 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 114
>AF132363-1|AAF68851.1| 145|Homo sapiens hnRNP 2H9D protein.
Length = 145
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 63 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 120
>AF132362-1|AAF68850.1| 297|Homo sapiens hnRNP 2H9B protein.
Length = 297
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 145 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 202
>AF132360-6|AAF68846.1| 139|Homo sapiens hnRNP 2H9E protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 57 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 114
>AF132360-5|AAF68845.1| 145|Homo sapiens hnRNP 2H9D protein.
Length = 145
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 63 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 120
>AF132360-4|AAF68848.1| 215|Homo sapiens hnRNP 2H9C protein.
Length = 215
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 63 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 120
>AF132360-3|AAF68844.1| 297|Homo sapiens hnRNP 2H9B protein.
Length = 297
Score = 33.9 bits (74), Expect = 0.67
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 500 GCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAV 321
G V M +PFRAT ++I FFS L+ V G+ TG+A V F T DA A+
Sbjct: 145 GHFVHMRGLPFRATENDIANFFS--PLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAM 202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,054,126
Number of Sequences: 237096
Number of extensions: 1337587
Number of successful extensions: 3721
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 3509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3713
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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