Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_I01
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 110 9e-25
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 110 9e-25
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 107 1e-23
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 107 1e-23
U23413-1|AAA64290.2| 182|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassi... 30 1.6
AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative pota... 30 1.6
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 110 bits (265), Expect = 9e-25
Identities = 57/99 (57%), Positives = 70/99 (70%)
Frame = -3
Query: 732 PGXTFLXRXQSEXXXSVHXNAINAVXLKXPWVLTFXYGRALQASVLRAWEGKTENILAGQ 553
PG TFL QSE + + NAIN+V L PW LTF YGRALQASVL+AW GK ENI A Q
Sbjct: 269 PGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQ 328
Query: 552 QELIKRAKANGLAAVGKYVAGSIPSLAASKSNFVKSHAY 436
+ L+ R+KANG A++GKY AG + AA++S FV H+Y
Sbjct: 329 KTLLHRSKANGDASLGKY-AGEDAAGAAAESLFVAKHSY 366
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 110 bits (265), Expect = 9e-25
Identities = 57/99 (57%), Positives = 70/99 (70%)
Frame = -3
Query: 732 PGXTFLXRXQSEXXXSVHXNAINAVXLKXPWVLTFXYGRALQASVLRAWEGKTENILAGQ 553
PG TFL QSE + + NAIN+V L PW LTF YGRALQASVL+AW GK ENI A Q
Sbjct: 269 PGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQ 328
Query: 552 QELIKRAKANGLAAVGKYVAGSIPSLAASKSNFVKSHAY 436
+ L+ R+KANG A++GKY AG + AA++S FV H+Y
Sbjct: 329 KTLLHRSKANGDASLGKY-AGEDAAGAAAESLFVAKHSY 366
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 107 bits (256), Expect = 1e-23
Identities = 53/99 (53%), Positives = 64/99 (64%)
Frame = -3
Query: 732 PGXTFLXRXQSEXXXSVHXNAINAVXLKXPWVLTFXYGRALQASVLRAWEGKTENILAGQ 553
PG FL QSE +++ NAIN V K PW LTF YGRALQAS L W GK ENI A Q
Sbjct: 267 PGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQ 326
Query: 552 QELIKRAKANGLAAVGKYVAGSIPSLAASKSNFVKSHAY 436
+ L+ RA+ N LA+VGKY + AAS+S FV +H+Y
Sbjct: 327 EVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 365
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 107 bits (256), Expect = 1e-23
Identities = 53/99 (53%), Positives = 64/99 (64%)
Frame = -3
Query: 732 PGXTFLXRXQSEXXXSVHXNAINAVXLKXPWVLTFXYGRALQASVLRAWEGKTENILAGQ 553
PG FL QSE +++ NAIN V K PW LTF YGRALQAS L W GK ENI A Q
Sbjct: 268 PGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQ 327
Query: 552 QELIKRAKANGLAAVGKYVAGSIPSLAASKSNFVKSHAY 436
+ L+ RA+ N LA+VGKY + AAS+S FV +H+Y
Sbjct: 328 EVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366
>U23413-1|AAA64290.2| 182|Caenorhabditis elegans Hypothetical
protein B0353.1 protein.
Length = 182
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 647 GPGF*RSXTGAPXRLRCSAPGKGRPRTF-SPDSRS*SSVLRPTVSQQSAN 501
GP RS +GA ++R RP F SP S S + + PT ++ S+N
Sbjct: 20 GPMLHRSPSGAKRKIRQKREEASRPSPFLSPSSSSSQTSISPTPTETSSN 69
>Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical
protein F08B12.3c protein.
Length = 1086
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -1
Query: 269 NFFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 108
+F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 98 DFDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 151
>Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical
protein F08B12.3b protein.
Length = 1107
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -1
Query: 269 NFFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 108
+F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 119 DFDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 172
>Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical
protein F08B12.3a protein.
Length = 1119
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -1
Query: 269 NFFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 108
+F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 119 DFDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 172
>AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassium
channel protein.
Length = 1107
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -1
Query: 269 NFFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 108
+F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 119 DFDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 172
>AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative
potassium channel Slo-2 protein.
Length = 1119
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -1
Query: 269 NFFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 108
+F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 119 DFDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,238,566
Number of Sequences: 27780
Number of extensions: 288688
Number of successful extensions: 640
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -