Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_H24
         (816 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g52530.2 68418.m06518 dentin sialophosphoprotein-related cont...    28   8.5  
At5g52530.1 68418.m06517 dentin sialophosphoprotein-related cont...    28   8.5  
At2g28950.1 68415.m03521 expansin, putative (EXP6) similar to ex...    28   8.5  

>At5g52530.2 68418.m06518 dentin sialophosphoprotein-related
           contains weak similarity to dentin sialophosphoprotein
           precursor (Dentin matrix protein-3) (DMP- 3)
           (Swiss-Prot:P97399) [Mus musculus]
          Length = 828

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 18/64 (28%), Positives = 25/64 (39%)
 Frame = -1

Query: 792 RKXKGPEGNPXXXXXXXPQKXLRKKKTEXFLCRKXQXGXXPPPGGGXRXPXKSSXPLRXP 613
           R+ +G  G+P       PQ   R +     L         PPPGG  R   + +  +R P
Sbjct: 639 RRERG--GSPVVRRLHHPQSESRSRSRSPVLWNGRNRSPPPPPGG-FRADERMTERVRLP 695

Query: 612 FGXR 601
           F  R
Sbjct: 696 FQKR 699


>At5g52530.1 68418.m06517 dentin sialophosphoprotein-related
           contains weak similarity to dentin sialophosphoprotein
           precursor (Dentin matrix protein-3) (DMP- 3)
           (Swiss-Prot:P97399) [Mus musculus]
          Length = 828

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 18/64 (28%), Positives = 25/64 (39%)
 Frame = -1

Query: 792 RKXKGPEGNPXXXXXXXPQKXLRKKKTEXFLCRKXQXGXXPPPGGGXRXPXKSSXPLRXP 613
           R+ +G  G+P       PQ   R +     L         PPPGG  R   + +  +R P
Sbjct: 639 RRERG--GSPVVRRLHHPQSESRSRSRSPVLWNGRNRSPPPPPGG-FRADERMTERVRLP 695

Query: 612 FGXR 601
           F  R
Sbjct: 696 FQKR 699


>At2g28950.1 68415.m03521 expansin, putative (EXP6) similar to
           expansin GI:2828241 from [Brassica napus]; contains Pfam
           profile PF01357: Pollen allergen
          Length = 257

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 550 CXPWXQQPXXPGGWCAXPXP 609
           C P   QP   GGWC  P P
Sbjct: 110 CPPNFAQPSDNGGWCNPPRP 129


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,664,484
Number of Sequences: 28952
Number of extensions: 115218
Number of successful extensions: 111
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)