Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H23
(806 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 122 3e-28
02_04_0017 + 18937774-18937864,18938505-18940945 120 1e-27
01_06_0662 + 30987187-30987277,30987825-30990214 110 1e-24
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 100 1e-21
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 93 3e-19
03_05_0511 + 25056018-25059107 76 4e-14
02_04_0148 - 20198407-20201424 62 4e-10
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 39 0.005
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 38 0.007
04_01_0330 - 4369326-4370852 30 2.5
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 30 2.5
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 122 bits (295), Expect = 3e-28
Identities = 56/96 (58%), Positives = 69/96 (71%)
Frame = -2
Query: 541 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 362
P L V+ PE A+GGIYGVLN++RGHVFEE Q GTP++ +KAYLPV ESFGF+
Sbjct: 723 PRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFS 782
Query: 361 ADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQ 254
+ LR+ T GQAFPQCVFDHW ++ P+ S QA Q
Sbjct: 783 SQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQ 818
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = -1
Query: 665 LRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP*SSC 486
+RG+ F + DV LH DAIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ P ++
Sbjct: 682 MRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENAL 741
Query: 485 G 483
G
Sbjct: 742 G 742
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 285 DPCEPQSKPYNVVQETRKRKGLKE 214
DP E S+ +V + RKRKGLKE
Sbjct: 808 DPLEVSSQANQLVLDIRKRKGLKE 831
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 120 bits (289), Expect = 1e-27
Identities = 54/94 (57%), Positives = 67/94 (71%)
Frame = -2
Query: 541 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 362
P L V+ PE A+GGIYGVLN++RGHVFEE Q GTP++ +KAYLPV ESFGF+
Sbjct: 723 PRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFS 782
Query: 361 ADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQA 260
+ LR+ T GQAFPQCVFDHW ++ P+ QA
Sbjct: 783 SQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQA 816
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = -1
Query: 665 LRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP*SSC 486
+RG+ F + DV LH DAIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ P ++
Sbjct: 682 MRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENAL 741
Query: 485 G 483
G
Sbjct: 742 G 742
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -3
Query: 285 DPCEPQSKPYNVVQETRKRKGLKE 214
DP E S+ +VQ+ RKRKGLKE
Sbjct: 808 DPLEAGSQASTLVQDIRKRKGLKE 831
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 110 bits (265), Expect = 1e-24
Identities = 52/95 (54%), Positives = 65/95 (68%)
Frame = -2
Query: 541 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 362
P L V+ PE A+GGIY VLN++RGHVFEE Q GTP++ +KAYLPV ESFGFT
Sbjct: 721 PRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFT 780
Query: 361 ADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQAL 257
+ LR+ T GQAFP VFDHW++L P+ + L
Sbjct: 781 STLRAATSGQAFPLFVFDHWEMLSVDPLEPGTRQL 815
Score = 89.4 bits (212), Expect = 3e-18
Identities = 40/60 (66%), Positives = 48/60 (80%)
Frame = -1
Query: 662 RGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP*SSCG 483
RG+ F + DV LH+DAIHRGGGQIIPT RR +YA LTA+PRL+EPVYL EIQ P ++ G
Sbjct: 681 RGICFEVCDVILHSDAIHRGGGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALG 740
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 100 bits (240), Expect = 1e-21
Identities = 48/109 (44%), Positives = 65/109 (59%)
Frame = -2
Query: 544 SPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 365
SP L V VP+ AVG +YGVLN R G + EES+ GTP+ ++ YLPV +SF F
Sbjct: 732 SPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNLRFYLPVAKSFDF 791
Query: 364 TADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTGNEKEERIE 218
T LR+ T GQAFPQC+F HWQ + P + +A + T K + ++
Sbjct: 792 TEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLK 840
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/61 (62%), Positives = 48/61 (78%)
Frame = -1
Query: 665 LRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP*SSC 486
+RGV F + DVTLH+D+IHRGGGQ+IPT RR +YA LTA PRLMEP+Y +IQ P ++
Sbjct: 692 MRGVCFELCDVTLHSDSIHRGGGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQVPKTAV 751
Query: 485 G 483
G
Sbjct: 752 G 752
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 92.7 bits (220), Expect = 3e-19
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = -2
Query: 550 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 371
+ +P L +++ P V IY VL+RRRGHV + GTP+++VKA+LPV ESF
Sbjct: 846 MANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVKAFLPVIESF 905
Query: 370 GFTADLRSNTGGQAFPQCVFDHWQVLPWRPV 278
GF DLR +T GQAF VFDHW ++P P+
Sbjct: 906 GFETDLRYHTQGQAFCLSVFDHWAIVPGDPL 936
Score = 71.7 bits (168), Expect = 6e-13
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = -1
Query: 665 LRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP 498
+R V+F I + + + +HRGGGQIIPT RR +Y+ L A PRLMEPVY EIQ P
Sbjct: 808 IRNVKFKILNANIAPEPLHRGGGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQTP 863
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 75.8 bits (178), Expect = 4e-14
Identities = 38/100 (38%), Positives = 52/100 (52%)
Frame = -2
Query: 580 LEDACTHVC*LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIV 401
+++AC P L F + + P +G Y VL+R+R V +E GT +F V
Sbjct: 873 VKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEGTSLFTV 932
Query: 400 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRP 281
AYLPV ES GF+ +LRS T G A V HW+ +P P
Sbjct: 933 HAYLPVAESVGFSNELRSVTAGAASALLVLSHWEAIPEDP 972
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 638 DVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP*SSCG 483
D H++ + GQ+I + ++ +PRL+E +Y CE+ P G
Sbjct: 854 DAANHSEQYNIFSGQVITAVKEACREAVVQNKPRLVEAMYFCELTTPTEQLG 905
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 62.5 bits (145), Expect = 4e-10
Identities = 34/100 (34%), Positives = 46/100 (46%)
Frame = -2
Query: 580 LEDACTHVC*LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIV 401
+ +AC P L F + + P +G +Y VL R V +E GT +F V
Sbjct: 849 VREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEGTSLFTV 908
Query: 400 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRP 281
AYL V ES F+ LR+ T G A F HW+ +P P
Sbjct: 909 HAYLSVAESSEFSKKLRNATAGAASALLAFSHWETVPQDP 948
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 599 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP*SSCG 483
GQII R A +L ++PRL+EP+Y CE+ P G
Sbjct: 843 GQIITAVREACQAAILESKPRLVEPMYFCELTTPTEQLG 881
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = -2
Query: 514 VKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 335
V+ PE +G + G LN RRG V G + +V A++P+ E F + + LR T G
Sbjct: 658 VEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDAFVPLAEMFQYVSTLRGMTKG 716
Query: 334 QAFPQCVFDHWQVLP 290
+A + V+P
Sbjct: 717 RASYTMQLAKFDVVP 731
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -2
Query: 541 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 362
PV+ + V+ VP G + G +N+R+G + Q +V ++P+N FG++
Sbjct: 671 PVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLNNMFGYS 728
Query: 361 ADLRSNTGGQ 332
LRS T G+
Sbjct: 729 TALRSMTQGK 738
>04_01_0330 - 4369326-4370852
Length = 508
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 583 VGMIWPPPLWMASVWSVTS 639
+G IWPPP+W S TS
Sbjct: 487 IGKIWPPPVWFKRCTSATS 505
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = -2
Query: 523 YIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSN 344
Y VPE +G + +L +RRG + + ++K +P G + +
Sbjct: 506 YEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLIGLRNAVLTA 565
Query: 343 TGGQAFPQCVFDHWQVLPW 287
+ G A +FD + PW
Sbjct: 566 SRGTAILNTIFDSYG--PW 582
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,309,516
Number of Sequences: 37544
Number of extensions: 433321
Number of successful extensions: 1097
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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