Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H22
(848 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 165 5e-42
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 163 3e-41
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 126 4e-30
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 66 4e-12
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 65 1e-11
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 36 0.010
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.089
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.16
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.16
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 31 0.27
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 30 0.36
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 30 0.48
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.63
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.83
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 1.1
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 29 1.1
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 28 1.5
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 28 1.5
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 28 1.9
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.9
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 28 1.9
SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.5
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 27 2.5
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.5
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.5
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 2.5
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 3.4
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 3.4
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.4
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 4.4
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.4
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.9
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 26 5.9
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 5.9
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.9
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 5.9
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 7.8
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 7.8
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 7.8
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 165 bits (402), Expect = 5e-42
Identities = 85/168 (50%), Positives = 109/168 (64%)
Frame = -1
Query: 722 GERXMTKDNNLXGKFELTGIPPGAAWRASN*GHLRHRCQRYPQRFRYREVHQQENKITIT 543
GER TKD NL GKFEL+GIPP + + KITIT
Sbjct: 443 GERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITIT 502
Query: 542 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISD 363
NDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+
Sbjct: 503 NDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDA 562
Query: 362 SDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 219
SDK+ I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 563 SDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
Score = 68.9 bits (161), Expect = 8e-13
Identities = 41/100 (41%), Positives = 48/100 (48%)
Frame = -2
Query: 832 GXXAQIXKGXXXIPXKQIQTFPTYXDXQPXVXXPXXGVSVX*PKITTXSVNSS*PGSHXA 653
G + K IP K+ + F TY D QP V K G A
Sbjct: 406 GVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPA 465
Query: 652 XRGVPQIEVTFDIDANGILNVSAIEKSTNKRTRSPLPTTK 533
RGVPQIEVTFD+DANGILNVSA+EK T K + + K
Sbjct: 466 PRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDK 505
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 163 bits (396), Expect = 3e-41
Identities = 84/168 (50%), Positives = 109/168 (64%)
Frame = -1
Query: 722 GERXMTKDNNLXGKFELTGIPPGAAWRASN*GHLRHRCQRYPQRFRYREVHQQENKITIT 543
GER TKD NL GKFEL+GIPP + + KITIT
Sbjct: 443 GERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITIT 502
Query: 542 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISD 363
NDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+
Sbjct: 503 NDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDA 562
Query: 362 SDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 219
SDK+T+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 563 SDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
Score = 68.5 bits (160), Expect = 1e-12
Identities = 41/100 (41%), Positives = 48/100 (48%)
Frame = -2
Query: 832 GXXAQIXKGXXXIPXKQIQTFPTYXDXQPXVXXPXXGVSVX*PKITTXSVNSS*PGSHXA 653
G + K IP K+ + F TY D QP V K G A
Sbjct: 406 GVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPA 465
Query: 652 XRGVPQIEVTFDIDANGILNVSAIEKSTNKRTRSPLPTTK 533
RGVPQIEVTFD+DANGILNVSA+EK T K + + K
Sbjct: 466 PRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDK 505
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 126 bits (304), Expect = 4e-30
Identities = 69/170 (40%), Positives = 100/170 (58%), Gaps = 3/170 (1%)
Frame = -1
Query: 722 GERXMTKDNNLXGKFELTGIPPGAAWRASN*GHLRHRCQRYPQRFRYREVHQ-QENKITI 546
GER +TKDNNL GKF+L GIPP + + + K+ I
Sbjct: 472 GERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVI 531
Query: 545 TNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEKI 369
NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L K+
Sbjct: 532 KNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKV 591
Query: 368 SDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGIYNPIITKMY 222
DKQ +LD D +WL+ + A KEE+E ++++L+ + +PI K+Y
Sbjct: 592 DPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
Score = 51.2 bits (117), Expect = 2e-07
Identities = 31/75 (41%), Positives = 38/75 (50%)
Frame = -2
Query: 796 IPXKQIQTFPTYXDXQPXVXXPXXGVSVX*PKITTXSVNSS*PGSHXAXRGVPQIEVTFD 617
IP ++ Q F T D Q V K G A RGVPQIEVTF+
Sbjct: 447 IPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFE 506
Query: 616 IDANGILNVSAIEKS 572
+DANG+L VSA++KS
Sbjct: 507 VDANGVLTVSAVDKS 521
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 66.5 bits (155), Expect = 4e-12
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Frame = -1
Query: 722 GERXMTKDNNLXGKFELTGIPPGAAWRASN*GHLRHRCQRYPQRFRYREVHQQENKITIT 543
GER +N G+F+LTGIPP +A + + + I IT
Sbjct: 448 GERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEIT 507
Query: 542 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISD 363
N G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T+ + + K+
Sbjct: 508 NSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLKR 567
Query: 362 SDKQTI---LDKCNDTIKWLDSN 303
DK I L +C ++ D+N
Sbjct: 568 GDKSKIEAQLAECMSQLELEDTN 590
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 64.9 bits (151), Expect = 1e-11
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Frame = -1
Query: 722 GERXMTKDNNLXGKFELTGIPPGAAWRASN*GHLRHRCQRYPQRFRYREVHQQENKITIT 543
GER + +DN L G F+LTGI P + + +++ IT+
Sbjct: 486 GERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVA 545
Query: 542 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME--DEKLKEKI 369
G L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++ +KL ++
Sbjct: 546 GSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQA 604
Query: 368 SDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 219
+ + I D K ++ E+ + K E++ + + +Y+
Sbjct: 605 VEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYK 654
Score = 52.0 bits (119), Expect = 1e-07
Identities = 32/90 (35%), Positives = 44/90 (48%)
Frame = -2
Query: 832 GXXAQIXKGXXXIPXKQIQTFPTYXDXQPXVXXPXXGVSVX*PKITTXSVNSS*PGSHXA 653
G ++ IP ++ Q F T D Q V + N G A
Sbjct: 449 GVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPA 508
Query: 652 XRGVPQIEVTFDIDANGILNVSAIEKSTNK 563
+G PQIEV+FD+DA+GI+NVSA +K+TNK
Sbjct: 509 PKGQPQIEVSFDVDADGIINVSARDKATNK 538
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 35.5 bits (78), Expect = 0.010
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = -1
Query: 554 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED--EK 384
++++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAP 600
Query: 383 LKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGIYNPI 237
+ S + +L K D WL + + K Y K ++L + PI
Sbjct: 601 FTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.089
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -1
Query: 518 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 339
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 338 K 336
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.16
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -1
Query: 536 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 357
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 356 KQTILDKCNDTIK 318
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.5 bits (68), Expect = 0.16
Identities = 26/118 (22%), Positives = 56/118 (47%)
Frame = -1
Query: 608 QRYPQRFRYREVHQQENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNAL 429
++Y ++ + E+ +++ +K +KEE+E +NE + E ++Q + ++N
Sbjct: 1581 KQYYEKEKETEILAARSELVAEKEK---TKEELENQLNEKSQRIKELEEQAQKNSSENTH 1637
Query: 428 ESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 255
++ +K +E EKLKE ++ D K + + A YE K ++L+
Sbjct: 1638 DNIDDMIKQQVE-EKLKENSANFDV-----KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 30.7 bits (66), Expect = 0.27
Identities = 27/124 (21%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Frame = -1
Query: 593 RFRYREVHQQENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE-SYC 417
R + RE+ +++N + + L+ + ++ + E E K+ ET++ KN+ + +
Sbjct: 469 RTQNREIDEEKNHLRL------LASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEI 522
Query: 416 FSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN--QLADK-EEYEHKQKELEGIY 246
++ E LK +K ++++ IK + N +L +EY +K K+ E Y
Sbjct: 523 HDLREENEGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETY 582
Query: 245 NPII 234
N ++
Sbjct: 583 NEVM 586
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.3 bits (65), Expect = 0.36
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = -1
Query: 536 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISDS 360
K R +E I + EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 82 KQRAQEERIRQ--KEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRLQ 138
Query: 359 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 261
++Q ++ + ++ + Q +E+ +K+++
Sbjct: 139 EQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.9 bits (64), Expect = 0.48
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 19/127 (14%)
Frame = -1
Query: 581 REVHQQENKITITNDKGRLSKEEIERMVNE----AEKYRNE----DDKQK--ETIQAKN- 435
RE+ + E I + L KEE+E++ +E +E+Y ++ D+ QK +T++ +N
Sbjct: 578 REIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENN 637
Query: 434 -ALESYCFSMKSTMEDEKLKE-------KISDSDKQTILDKCNDTIKWLDSNQLADKEEY 279
A E + +E K+ E K ++ +KQ I K ++ +K D N+L E+
Sbjct: 638 KAKEDSTSKTSNLLEQLKMTEAEVDSLRKENEENKQVIALKESELVKSND-NKLLLNEQI 696
Query: 278 EHKQKEL 258
E +L
Sbjct: 697 ESLNDQL 703
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.5 bits (63), Expect = 0.63
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = -1
Query: 581 REVHQQENKI-TITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMK 405
R++ Q +I + +K SKE ++ EAE+ E +E + + + S K
Sbjct: 421 RKLRQLRVEIRALEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAK 480
Query: 404 STMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 264
+++ LK K D++++ D +K+ L + EY +QK
Sbjct: 481 RRLDE--LKAKAEDAERRNDFTLAAD-LKYYGIPDLQKRIEYLEQQK 524
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.83
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 536 KGRLSKEEIERMVNEAEKYRNEDD 465
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 380 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 255
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 629 GHLRHRCQRYPQRFRYREVHQQENKITITNDKGRLSKEEIERM-VNEAEKYRNEDD 465
G + CQ+Y + YR+ +++ ++ ND ++ E+M + E RN +D
Sbjct: 27 GDVCFECQKYNENCVYRQFYRKIKRLKYNNDNSKIDNFSNEQMNIPEFISVRNLND 82
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -1
Query: 521 KEEIERMVNEAEKYRNEDDKQ-KETIQAKNAL 429
KEE+E+ + +K RNE+ K+ KET+ NAL
Sbjct: 684 KEEVEK--KDGDKERNEEKKEEKETLPVLNAL 713
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/100 (20%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 563 ENKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQAKNAL------ESYCFSMK 405
EN++ I N L K +++ R ++ +N+++ +++ A + L ++ +
Sbjct: 800 ENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFR 859
Query: 404 STMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 285
+DEKLK+ D ++ N+ + D ++D E
Sbjct: 860 KFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDFE 899
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.9 bits (59), Expect = 1.9
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = -1
Query: 608 QRYPQRFRYREVHQQENKITITNDKGRLSKEEIE-RMVNEAEKYRNEDDKQKETIQAKNA 432
QR Q +R + Q++ K+ ++ K+E E + + E EK R DK+K+ AK
Sbjct: 554 QRVLQAYREKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKR---DKKKQLKLAKE- 609
Query: 431 LESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 255
+ E E+L E+ + K + + K + +L K E E KQ+ELE
Sbjct: 610 ------EERQRREAERLAEQA--AQKALEAKRQEEARKKREEQRL--KREQEKKQQELE 658
Score = 27.9 bits (59), Expect = 1.9
Identities = 22/96 (22%), Positives = 43/96 (44%)
Frame = -1
Query: 620 RHRCQRYPQRFRYREVHQQENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQA 441
R Q+ +R + + QQE + RL +EE +R++ E K R + DK++E +
Sbjct: 662 REEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEE-RKRREKLDKEEEERRR 720
Query: 440 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC 333
+ LE + + + K+ + + + D C
Sbjct: 721 RELLEKESEEKERRLREAKIAAFFAPNQTKEGSDGC 756
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -1
Query: 518 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 342
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 341 DKCNDTIKWLDSNQLADKEEYEHKQK 264
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 27.9 bits (59), Expect = 1.9
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -1
Query: 509 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC- 333
E ++EK ++ K + KNA ++ M DE+ E S K+ K
Sbjct: 100 EEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSK 159
Query: 332 NDTIKWLDSNQLADKEEYEHKQKE 261
+D + LD + E+ + K+K+
Sbjct: 160 DDGSEALDDGDIESSEKDKKKKKK 183
>SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 430
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -2
Query: 595 NVSAIEKSTNKRTRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTSKRRPSRPRMH 431
+ S IEKS K ++ + + + SP++ S + +++RR S+P+ H
Sbjct: 182 DASTIEKSLEKEVKT-IYDSNIASPKESSDAIDADHAMIDESRSTQRRKSKPKKH 235
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.5 bits (58), Expect = 2.5
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = -1
Query: 536 KGRLSKEEIERMVN---EAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 366
KG+ K+ +E N E EK + +A+ A + +E EK KEK
Sbjct: 221 KGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQK 280
Query: 365 DSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 255
D D++ DT+ D NQ+ +E E QKE++
Sbjct: 281 DKDQE------QDTVS--DKNQI---DEIEKGQKEVD 306
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 27.5 bits (58), Expect = 2.5
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Frame = -1
Query: 587 RYREVHQQENKITI--TNDKGRLSK-----EEIERMVNEAEKYRNEDDKQKETIQAKNAL 429
R +H+Q + + T+D G + + +EIE M + + + D + + N +
Sbjct: 185 RLVSIHRQIDGFAVRPTSDPGFIDRTMEQLKEIEEMKDSNGMFCDADHVPLQGQELCNGI 244
Query: 428 ESYCFSMKSTMEDEKLKEKISDSDKQT 348
CFS +ED K KE +SD K +
Sbjct: 245 LEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 2.5
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = -1
Query: 530 RLSKEEIERMVNEAEKYRNEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDK 354
+L++E +ER+ E ++YR + + E K +LE ++ + L+ + D
Sbjct: 950 KLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCENITKDS 1009
Query: 353 QTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIY 246
+T + + K L +N+L+ E + E E Y
Sbjct: 1010 ETRVALLLEENKHL-NNELSSHRNAEKQHLEKENDY 1044
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -1
Query: 542 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 366
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 365 DSDKQT 348
+D+ T
Sbjct: 695 -TDRLT 699
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = -1
Query: 575 VHQQENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 399
++ ++++TIT++ S E++E++ N AEK + E + K + ++ LES S +
Sbjct: 284 INDLKSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRREL 339
Query: 398 ME 393
+E
Sbjct: 340 LE 341
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = -1
Query: 566 QENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 387
++ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 530 KKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KNR 580
Query: 386 KLKEKISD 363
KLK+K S+
Sbjct: 581 KLKKKASN 588
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = -1
Query: 554 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 375
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 374 KISDSDKQTILDKCNDTIK 318
K S +K DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 503 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 399
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -1
Query: 500 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 321
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 320 KWLDSNQLADKEEYEHKQKELEGIYNPI 237
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -1
Query: 473 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 312
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 5.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -1
Query: 521 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 369
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 368 SDSDKQTILDKCND 327
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 5.9
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = -1
Query: 599 PQRFRYREVHQQENKITITNDKGRL-SKEEIERMVNEAEKYRNEDDKQKETI-QAKNALE 426
PQ F+ ++ ++++ T+ G + S + R++ E +K + E Q K LE
Sbjct: 17 PQCFKIENQYETFSRLSETSTPGVVPSVSTLWRLLFELQKMIECEPSCVEYFRQRKEELE 76
Query: 425 SYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIK 318
S+ S T +DE K+ + ++ D IK
Sbjct: 77 SHVDSEIETSKDESSVNKVEEKVEEFKEDNVEQEIK 112
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 5.9
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -1
Query: 554 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 378
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 377 EKISDSDKQTILDKC 333
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 211 EESPEVCRASRAEHPEPE 158
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
Score = 25.8 bits (54), Expect = 7.8
Identities = 24/98 (24%), Positives = 49/98 (50%)
Frame = -1
Query: 596 QRFRYREVHQQENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 417
Q RY E+ + K+ +NDK LS EE +++ A Y+N ++ + + +++E
Sbjct: 17 QAERYEEMVENMKKVACSNDK--LSVEE-RNLLSVA--YKNIIGARRASWRIISSIEQKE 71
Query: 416 FSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN 303
S +T + +KE + + + D C+D + L+ +
Sbjct: 72 ESRGNTRQAALIKEYRKKIEDE-LSDICHDVLSVLEKH 108
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 524 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 402
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 536 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 426
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 7.8
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 470 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 294
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 293 DK 288
DK
Sbjct: 238 DK 239
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -1
Query: 521 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 342
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 341 D 339
D
Sbjct: 451 D 451
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,734,237
Number of Sequences: 5004
Number of extensions: 52134
Number of successful extensions: 288
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -