Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H21
(792 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.25
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 28 1.3
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 28 1.8
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 28 1.8
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.1
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 27 3.1
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 26 5.4
SPBC119.04 |mei3||meiosis inducing protein Mei3 |Schizosaccharom... 26 5.4
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 26 7.1
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 26 7.1
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch... 25 9.4
SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces ... 25 9.4
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.7 bits (66), Expect = 0.25
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -3
Query: 565 PAATQSSALTDTPTTSRLASITTSRC*S*IDRSRWTSTQSRRVCTRETPSMTSGPPPPAG 386
PA+T S+ + +P S S TTS I + ++T + S TS PPPPA
Sbjct: 319 PASTSSTGTSSSPLPSTSTSCTTSTS---IPPTGNSTTPVTPTVPPTSTSSTSTPPPPAS 375
Query: 385 DS 380
S
Sbjct: 376 TS 377
Score = 26.6 bits (56), Expect = 4.1
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -3
Query: 565 PAATQSSALTDTPTTSRLASITTSRC*S*IDRSRWTSTQSRRVCTRETPSMTSGPPPPAG 386
P +T S+ +P + S TTS I + ++T + S TS PPPPA
Sbjct: 265 PTSTSSTDTNSSPLPTTSTSCTTSTS---IPPTGNSTTPVTPTVPPTSTSSTSTPPPPAS 321
Query: 385 DS 380
S
Sbjct: 322 TS 323
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -3
Query: 562 AATQSSALTDTPTTSRLASITTSRC*S*IDRSRWTSTQSRRVCTRETPSMTSGPPPPAGD 383
A + SSA P+TS AS+++ S S+ +S+ S R + + S SG +G
Sbjct: 500 ATSYSSASASYPSTSMSASLSSVHTSSATSSSKSSSSSSSRSGSSSSSSSRSGSTSSSGS 559
Query: 382 S 380
S
Sbjct: 560 S 560
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +1
Query: 355 SDVEPRFSVSPQPVAEARSSLTASPV 432
++VEP FS++P+P E + +++ S +
Sbjct: 11 NNVEPTFSITPEPTFETQPTISKSEI 36
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 262 GSNPRFMLRLVGYFSEHSVDVNLVST-TFCSTSDVEPRFSVSPQPVAEAR-SSLTASPVC 435
G + +F L +S S + +L FC T V P+ +PQ V E + + +T+SP
Sbjct: 667 GFSDQFYKELTQKYSLESGNSSLKPIYNFCETGKVTPQIYFAPQEVWEIKGAQITSSPAY 726
Query: 436 RHA 444
+ A
Sbjct: 727 KAA 729
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 3.1
Identities = 22/81 (27%), Positives = 29/81 (35%)
Frame = -3
Query: 601 SEPSPGTRPRTRPAATQSSALTDTPTTSRLASITTSRC*S*IDRSRWTSTQSRRVCTRET 422
S S G+ +T + +A + PT S A + S + S T
Sbjct: 156 SYSSSGSYSQTYQSNANYTASSPLPTASANAPLPVPPPRRVSQNSSYASGSVPAATAAST 215
Query: 421 PSMTSGPPPPAGDSPRTGAPR 359
S PPPPA PR A R
Sbjct: 216 ASPVKKPPPPAPPKPRRLAAR 236
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 93 RSRARPRNHRPDQTTSRLSRRTYSPSS 173
RSR R R+ RP ++ SR R SPS+
Sbjct: 197 RSRRRSRSRRPGRSRSRRRSRRPSPSA 223
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 442 RVCTRETPSMTSGPPPPAGDSPR 374
RV PS T GPPPP P+
Sbjct: 414 RVTQGAPPSHTYGPPPPVQPKPK 436
>SPBC119.04 |mei3||meiosis inducing protein Mei3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 148
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 370 RFSVSPQPVAEARSSLTASPVCRHAGTVYWSSGTCRSSSNSAMS 501
R S SP+ + S+ T + HAGT + SS + R S A S
Sbjct: 27 RRSTSPRTSTGSSSTNTNTKTVDHAGTTFISSTSKRGRSTKAGS 70
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 326 FTSTECSEKYPTNRNMKRGF 267
F S C+E+YPT+ ++ R F
Sbjct: 1190 FCSRSCAERYPTDSSIMREF 1209
>SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1466
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = -2
Query: 527 DYKPPSKYNDIALLELDRQVPLDQYTVPACLHTGDAVNDERASATGWGL 381
+++ P+ Y L E + VPLD T+ C D GW +
Sbjct: 1318 EWRQPTGYKRTPLTECEGGVPLDAGTLHPCPGKEDDYYKAHPKPGGWSI 1366
>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 783
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 151 RDRRDVVWSGLWLRGRARDLHQGQPLRTLDRECRLAL 41
++ R+ +W ++ R + G+PL D EC AL
Sbjct: 405 KELRNRLWWSVYTMDRLISIATGRPLSIADSECDAAL 441
>SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -3
Query: 628 RLAQSDTCISEPSPGTRPRTRPAATQSSALTDTPTTSRLASITT 497
+ + + T S P T ++ + A + TPTT+R +S TT
Sbjct: 163 KFSPNPTQTSPGKPSTSESSQTDTSTRPANSQTPTTTRASSYTT 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,124,479
Number of Sequences: 5004
Number of extensions: 66030
Number of successful extensions: 262
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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