Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_H21
         (792 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    73   4e-15
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   3.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   4.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   4.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   7.5  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   7.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 72.5 bits (170), Expect = 4e-15
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
 Frame = -2

Query: 695 LCGGVLISERFVLTAGHCLSSREVGAVRYVYIGA--LARHETTNPSRRYAVIRAHRHPDY 522
           +CG  +IS+R+VLTA HC+       +  V +G    +    TN +  +++ +   HP Y
Sbjct: 187 ICGATIISKRYVLTAAHCIIDENTTKLAIV-VGEHDWSSKTETNATVLHSINKVIIHPKY 245

Query: 521 ----KPPSKYNDIALLELDRQVPLDQYTVPACL---HTGDAVNDERASATGWGLTENRGS 363
               K   + NDIALL+ ++ +       PACL   H  D+      +  GWG T   G 
Sbjct: 246 DIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLDSFAGSDVTVLGWGHTSFNGM 305

Query: 362 TSDVLQKVVLTKFTSTECSEKY 297
            S +LQK  L   T  EC + Y
Sbjct: 306 LSHILQKTTLNMLTQVECYKYY 327


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 625 LAQSDTCISEPSPGTRPRTRPAATQSSALT 536
           L++S+T   E    TRP  +   TQS+  T
Sbjct: 314 LSESETSSDEEEADTRPLKKEPITQSNKRT 343


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +1

Query: 76  VADPGVDPGLARVTTGPTKRRHAYHDVH 159
           V DPG   GL     G  K R    DVH
Sbjct: 50  VLDPGAITGLVASLDGALKLRIRCSDVH 77


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = -3

Query: 619 QSDTCISEPSPGTRPRTRPAATQSSALTDTPTTSR 515
           QS     +  PG  PR +  A Q   +  +P + +
Sbjct: 209 QSQAASQQSQPGMHPRQQQQAQQHQGVVTSPLSQQ 243


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 586 GTRPRTRPAATQSSALTDTPTTSRLASITTS 494
           G+RP   PA++ S   T T TT+   + T +
Sbjct: 90  GSRPLHPPASSTSLPATITTTTTTTTTTTAT 120


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 677 ISERFVLTAGHCLSSREVG 621
           IS   VL  G C+SSR  G
Sbjct: 40  ISRNRVLLRGQCISSRRNG 58


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 578 TTNPSRRYAVIRAHRHP 528
           T NPS+R     A +HP
Sbjct: 152 TVNPSKRITASEALKHP 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,184
Number of Sequences: 438
Number of extensions: 4963
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)