Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_H19
         (808 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0479 + 3606663-3607448                                           29   3.3  
05_04_0011 + 17139322-17139451,17139552-17140174                       29   5.8  

>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 24/81 (29%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
 Frame = +1

Query: 355 PXFFFXPPXXPPXFFXXXKXGGPKXPXXXXX--PPPGGXP-TXGXXXGXXXKXFKXXXSP 525
           P  F  PP  PP F      GGP  P       PPP G P       G      +    P
Sbjct: 184 PIPFQRPPGVPPAF-----PGGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPP 238

Query: 526 PXXXLLKXPPPKXTSXPXGGP 588
           P       PPP     P   P
Sbjct: 239 PPFRPGMPPPPPGPQQPGQNP 259


>05_04_0011 + 17139322-17139451,17139552-17140174
          Length = 250

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/46 (30%), Positives = 15/46 (32%)
 Frame = +1

Query: 448 PPPGGXPTXGXXXGXXXKXFKXXXSPPXXXLLKXPPPKXTSXPXGG 585
           PPP   P  G   G   +       P        PPP   S P GG
Sbjct: 71  PPPPSPPNGGNVIGNGKRLTPTGPDPIHNEFQPPPPPPPPSPPNGG 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,361,941
Number of Sequences: 37544
Number of extensions: 146186
Number of successful extensions: 116
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)