Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_H18
         (826 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    39   2e-04
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.17 
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   4.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   6.5  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
 Frame = -1

Query: 718 PTPVVKHVGVPVXCPSTGPTP----VHVPAPYPVEKPV--PFAVPV----EKPVAYPVHV 569
           P PV + VGVPV  P     P    V++P PYP++  V  P  +P+     K +  PV  
Sbjct: 167 PVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPY 226

Query: 568 PVDRPY 551
            V++PY
Sbjct: 227 TVEKPY 232



 Score = 37.5 bits (83), Expect = 5e-04
 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
 Frame = -1

Query: 718 PTPVVKHVGVPVXCP--STGPTPVHVPAPYPVEKPVPFAVPVEKPVAYPV----HVPVDR 557
           P P+  +V  P+  P     P  +  P PY VEKP P  + VEKP    V     VPV +
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYP--IEVEKPFPVEVLKKFEVPVPK 254

Query: 556 PY 551
           PY
Sbjct: 255 PY 256



 Score = 36.3 bits (80), Expect = 0.001
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = -1

Query: 709 VVKHVGVPVXCPSTGPTPVHVPAPYPVEKPVPFAVPVEKPVAYPVHV 569
           + K +  PV      P P+ V  P+PVE    F VPV KP   PV V
Sbjct: 216 IPKVIEKPVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTV 262



 Score = 32.7 bits (71), Expect = 0.014
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
 Frame = -3

Query: 497 PYPVYKHVPYAVDRPVAVPV----KVPVDRPY--PVTVERH 393
           PY V K  P  V++P  V V    +VPV +PY  PVTV +H
Sbjct: 225 PYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTVYKH 265



 Score = 32.3 bits (70), Expect = 0.019
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = -1

Query: 664 PTPVHVPAPYPVEKPVPFAVPVEKPVAYPVHVPVDRP 554
           P P  V  PYP+E   PF V V K    PV  P   P
Sbjct: 223 PVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVP 259



 Score = 31.1 bits (67), Expect = 0.043
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
 Frame = -3

Query: 491 PVYKHVPYAVDRPVAVPVKVP----VDRPYPVTV 402
           P+YK +P  +++PV   V+ P    V++P+PV V
Sbjct: 211 PIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPVEV 244



 Score = 29.1 bits (62), Expect = 0.17
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -3

Query: 500 QPYPVYKHVPYAVDRPVAVPVKVPVDRPYPVTVER 396
           QPYP+  +V   +  P+   +   +++P P TVE+
Sbjct: 196 QPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEK 230



 Score = 28.7 bits (61), Expect = 0.23
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = -3

Query: 497 PYPVYKHVPYAVDRPV--AVP--VKVPVDRPYPVTV 402
           P PV++ V   V  PV  AVP  VKV + +PYP+ V
Sbjct: 167 PVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQV 202



 Score = 25.4 bits (53), Expect = 2.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 488 VYKHVPYAVDRPVAVPVKVPVDRPYPVTVER 396
           VY   PY +   V  P+K+P+ +  P  +E+
Sbjct: 192 VYIPQPYPLQVNVEQPIKIPIYKVIPKVIEK 222



 Score = 23.4 bits (48), Expect = 8.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 749 PVEVKVPVPQPYP 711
           P  VKV +PQPYP
Sbjct: 187 PHYVKVYIPQPYP 199


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 0.17
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 658 PVHVPAPYPVEKPVPFAVPVEKPV 587
           PV +  PYP+  P+P  +PV  PV
Sbjct: 625 PVTILVPYPIIIPLPLPIPVPIPV 648



 Score = 24.6 bits (51), Expect = 3.7
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 757 AIPPSKLRCPYRSPTPVVKHVGVPVXCPSTGPTPVHVPAPYPVEKPVPFAVPVEK 593
           +I P   R    SP P      +PV   S  P+PV + +P P +KP+    P  K
Sbjct: 350 SISPVSDRSESVSPVP-----SLPVRS-SPEPSPVLLRSPTPAKKPLISVAPASK 398



 Score = 24.6 bits (51), Expect = 3.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 664 PTPVHVPAPYPVEKPVP 614
           P P+ +P P P+  P+P
Sbjct: 631 PYPIIIPLPLPIPVPIP 647



 Score = 23.4 bits (48), Expect = 8.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 491 PVYKHVPYAVDRPVAVPVKVPV 426
           PV   VPY +  P+ +P+ VP+
Sbjct: 625 PVTILVPYPIIIPLPLPIPVPI 646


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 770 WRNTCHTPVEVKVPVPQPYPRCEA 699
           WR T H PV     VP+P P  EA
Sbjct: 421 WRAT-HPPVRPTPSVPRPLPSQEA 443


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 658 PVHVPAPYPVEKPVPFAVPVEKPV 587
           P H P  +PV    P  VP +  V
Sbjct: 465 PTHPPVSWPVSSDAPTTVPSDSRV 488


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,494
Number of Sequences: 2352
Number of extensions: 13955
Number of successful extensions: 70
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)