BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H15
(792 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated prot... 30 8.3
AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated prot... 30 8.3
>AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated protein
5-11 protein.
Length = 221
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 438 GIDTGIGCCTDCKIGSCIDSCRFESRPCCRGWH*RCSCSS 557
G +G G C C G C+ C + CC CSCSS
Sbjct: 51 GCGSGCGGCGGCGSGCCVPVCCCKPMCCCVP---ACSCSS 87
>AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 438 GIDTGIGCCTDCKIGSCIDSCRFESRPCCRGWH*RCSCSS 557
G +G G C C G C+ C + CC CSCSS
Sbjct: 51 GCGSGCGGCGGCGSGCCVPVCCCKPMCCCVP---ACSCSS 87
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,086,282
Number of Sequences: 237096
Number of extensions: 1865769
Number of successful extensions: 7226
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7225
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -