Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H14
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 281 3e-76
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 281 3e-76
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 281 3e-76
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 281 3e-76
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 281 3e-76
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 281 3e-76
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 281 5e-76
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 281 5e-76
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 281 5e-76
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 274 4e-74
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 269 1e-72
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 146 2e-35
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 125 3e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 122 4e-28
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 99 3e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 5e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 78 6e-15
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 78 6e-15
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.71
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.71
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.71
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.8
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 8.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.8
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 281 bits (690), Expect = 3e-76
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEMAT ASSSSLEKSY+ P
Sbjct: 224 FEQEMATAASSSSLEKSYELP 244
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 281 bits (690), Expect = 3e-76
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEMAT ASSSSLEKSY+ P
Sbjct: 224 FEQEMATAASSSSLEKSYELP 244
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 281 bits (690), Expect = 3e-76
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEMAT ASSSSLEKSY+ P
Sbjct: 224 FEQEMATAASSSSLEKSYELP 244
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 281 bits (690), Expect = 3e-76
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 199 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 258
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 259 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 318
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 319 YDESGPSIVHRKCF 332
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEMAT ASSSSLEKSY+ P
Sbjct: 180 FEQEMATAASSSSLEKSYELP 200
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 281 bits (690), Expect = 3e-76
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 229 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 288
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 289 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 348
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 349 YDESGPSIVHRKCF 362
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEMAT ASSSSLEKSY+ P
Sbjct: 210 FEQEMATAASSSSLEKSYELP 230
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 281 bits (690), Expect = 3e-76
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEMAT ASSSSLEKSY+ P
Sbjct: 224 FEQEMATAASSSSLEKSYELP 244
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 281 bits (688), Expect = 5e-76
Identities = 128/134 (95%), Positives = 133/134 (99%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEMAT ASSSSLEKSY+ P
Sbjct: 224 FEQEMATAASSSSLEKSYELP 244
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 281 bits (688), Expect = 5e-76
Identities = 128/134 (95%), Positives = 133/134 (99%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEMAT ASSSSLEKSY+ P
Sbjct: 224 FEQEMATAASSSSLEKSYELP 244
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 281 bits (688), Expect = 5e-76
Identities = 128/134 (95%), Positives = 133/134 (99%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEMAT ASSSSLEKSY+ P
Sbjct: 224 FEQEMATAASSSSLEKSYELP 244
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 274 bits (673), Expect = 4e-74
Identities = 127/134 (94%), Positives = 132/134 (98%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEMAT ASSSSLEKSY+ P
Sbjct: 224 FEQEMATAASSSSLEKSYELP 244
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 269 bits (660), Expect = 1e-72
Identities = 124/134 (92%), Positives = 128/134 (95%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSG
Sbjct: 242 LPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSG 301
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 302 GTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FE E+A ASSSSLEKSY+ P
Sbjct: 223 FESELAAAASSSSLEKSYELP 243
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 146 bits (353), Expect = 2e-35
Identities = 67/134 (50%), Positives = 90/134 (67%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N VLSG
Sbjct: 241 LPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSG 300
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+E
Sbjct: 301 GTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKE 360
Query: 338 YDESGPSIVHRKCF 297
Y++ G S +H++ F
Sbjct: 361 YEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 125 bits (302), Expect = 3e-29
Identities = 63/138 (45%), Positives = 85/138 (61%), Gaps = 13/138 (9%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDG+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y + VLSG
Sbjct: 246 LPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSG 305
Query: 518 GTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL- 375
GTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 306 GTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLM 365
Query: 374 -STFQQMWISKQEYDESG 324
Q W+SK+EY+E G
Sbjct: 366 KDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 122 bits (293), Expect = 4e-28
Identities = 61/151 (40%), Positives = 84/151 (55%), Gaps = 8/151 (5%)
Frame = -1
Query: 728 IQQLPREVLRLPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCD 564
+ +LP P+G G ER + PE LF +L E + + S D
Sbjct: 285 VDKLPSTPYAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLAD 344
Query: 563 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGG 393
+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGG
Sbjct: 345 IDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGG 404
Query: 392 SILASLSTFQQMWISKQEYDESGPSIVHRKC 300
SIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 405 SILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 99.1 bits (236), Expect = 3e-21
Identities = 41/112 (36%), Positives = 73/112 (65%)
Frame = -1
Query: 674 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 495
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 494 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
A+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 91.9 bits (218), Expect = 5e-19
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = -1
Query: 680 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 504
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 503 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 372
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 371 TFQQMWISKQEYDESGPSI 315
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 78.2 bits (184), Expect = 6e-15
Identities = 45/156 (28%), Positives = 82/156 (52%), Gaps = 5/156 (3%)
Frame = -1
Query: 743 DGHRCIQQLPREVLRLPDGQV--ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMK 570
D H + + ++V D Q+ I +G ERF PE LF PS + ++ CG+ E SI +
Sbjct: 240 DFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQ 299
Query: 569 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWI 399
C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W
Sbjct: 300 CPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWH 357
Query: 398 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 291
G L L+ + WI+++++DE G S+ F T
Sbjct: 358 CGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 78.2 bits (184), Expect = 6e-15
Identities = 45/156 (28%), Positives = 82/156 (52%), Gaps = 5/156 (3%)
Frame = -1
Query: 743 DGHRCIQQLPREVLRLPDGQV--ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMK 570
D H + + ++V D Q+ I +G ERF PE LF PS + ++ CG+ E SI +
Sbjct: 240 DFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQ 299
Query: 569 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWI 399
C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W
Sbjct: 300 CPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWH 357
Query: 398 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 291
G L L+ + WI+++++DE G S+ F T
Sbjct: 358 CGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -1
Query: 578 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 414
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 413 ----YSVWIGGSILASL-STFQQMWISKQEY 336
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 402 PYGVLPLWRSNDLNLHCRWGESCD 473
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 402 PYGVLPLWRSNDLNLHCRWGESCD 473
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 402 PYGVLPLWRSNDLNLHCRWGESCD 473
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 238 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 330
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 341 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 240
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 238 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 330
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 422 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 261
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,643,699
Number of Sequences: 27780
Number of extensions: 354588
Number of successful extensions: 1135
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -