Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_H13
         (862 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41508-6|ABS19459.1|  323|Caenorhabditis elegans Hypothetical pr...    29   5.6  
U41508-5|AAG00025.2|  511|Caenorhabditis elegans Hypothetical pr...    29   5.6  
AF326938-1|AAG49388.1|  511|Caenorhabditis elegans XG314 protein.      29   5.6  
Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p...    28   9.8  
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.        28   9.8  

>U41508-6|ABS19459.1|  323|Caenorhabditis elegans Hypothetical
           protein W01C8.5b protein.
          Length = 323

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -1

Query: 832 PXDVNGSCFAPKSTGLSKMSYNSRPMTQMGGR 737
           P DV+   F P  T  S + YNS     MGGR
Sbjct: 235 PEDVHSFAFTPNETTPSVLYYNSGNNFNMGGR 266


>U41508-5|AAG00025.2|  511|Caenorhabditis elegans Hypothetical
           protein W01C8.5a protein.
          Length = 511

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -1

Query: 832 PXDVNGSCFAPKSTGLSKMSYNSRPMTQMGGR 737
           P DV+   F P  T  S + YNS     MGGR
Sbjct: 423 PEDVHSFAFTPNETTPSVLYYNSGNNFNMGGR 454


>AF326938-1|AAG49388.1|  511|Caenorhabditis elegans XG314 protein.
          Length = 511

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -1

Query: 832 PXDVNGSCFAPKSTGLSKMSYNSRPMTQMGGR 737
           P DV+   F P  T  S + YNS     MGGR
Sbjct: 423 PEDVHSFAFTPNETTPSVLYYNSGNNFNMGGR 454


>Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical
           protein T23D8.4 protein.
          Length = 898

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 604 PRLESGGWIGPGVFYGGQNSVDGVSRRSDG 693
           PR   GG+ GPG ++ G+N   G  ++  G
Sbjct: 833 PRTGRGGYQGPGSWFPGRNERQGDKQKGSG 862


>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
           protein F43G9.6 protein.
          Length = 2034

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 445 IKNPRQHNGYHTVLEEFRTGTSLLFCTNLFYS 540
           IK PR+H GY+  LE+F    + +   N  YS
Sbjct: 890 IKRPRKHEGYNKELEDFEHFRTTMGNENWEYS 921


>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
          Length = 2034

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 445 IKNPRQHNGYHTVLEEFRTGTSLLFCTNLFYS 540
           IK PR+H GY+  LE+F    + +   N  YS
Sbjct: 890 IKRPRKHEGYNKELEDFEHFRTTMGNENWEYS 921


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,475,464
Number of Sequences: 27780
Number of extensions: 416055
Number of successful extensions: 905
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)