Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H11
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000263-6|AAO21394.1| 496|Caenorhabditis elegans Phenylalanyl ... 325 3e-89
AF000263-5|AAG00015.1| 552|Caenorhabditis elegans Phenylalanyl ... 325 3e-89
AL132943-13|CAC14396.3| 458|Caenorhabditis elegans Hypothetical... 49 5e-06
AL117207-24|CAB60398.3| 458|Caenorhabditis elegans Hypothetical... 49 5e-06
AB096637-1|BAC76737.1| 458|Caenorhabditis elegans mitochondrial... 49 5e-06
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z11795-1|CAA77838.1| 130|Caenorhabditis elegans pceh16-1 protei... 29 4.0
U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeo... 29 5.3
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z11794-1|CAA77837.1| 66|Caenorhabditis elegans ceh16-1 protein... 28 9.3
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 28 9.3
U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna ... 28 9.3
U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna ... 28 9.3
U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna ... 28 9.3
U40933-7|AAA81676.4| 122|Caenorhabditis elegans C.elegans homeo... 28 9.3
>AF000263-6|AAO21394.1| 496|Caenorhabditis elegans Phenylalanyl (f)
trna synthetaseprotein 1, isoform b protein.
Length = 496
Score = 325 bits (798), Expect = 3e-89
Identities = 149/193 (77%), Positives = 165/193 (85%)
Frame = -3
Query: 626 YGSQGYRYDWKIGEAQKNLLRTHTTAVSARMLYRLAQQTEFTPQKYFSIDKVFRNETLDA 447
YGS GY YDWKI EAQKN+LRTHTTAVSAR LY+LAQ+ F P K FSID+VFRNETLDA
Sbjct: 305 YGSAGYNYDWKIEEAQKNVLRTHTTAVSARQLYQLAQEG-FRPSKLFSIDRVFRNETLDA 363
Query: 446 THLAEFHQVEGVVADRGLGLADLITVLDAFFKRLGFDQLQFKPAYNPYTEPSMEIFAYHT 267
THLAEFHQVEGV+A++ L LA LI + FFK+LG L+FKP YNPYTEPSMEIFAYH
Sbjct: 364 THLAEFHQVEGVIAEKNLSLAHLIGIFTEFFKKLGITNLRFKPTYNPYTEPSMEIFAYHQ 423
Query: 266 GLAKWIEIGNSGVFRPEMLLPMGLPEDVNVIAWGLSLERPTMIKYGLNNIRDLVGPKVDL 87
GL KW+EIGNSG+FRPEMLLPMGLP DVNV +GLSLERPTMIKYG+NNIRDL G K+DL
Sbjct: 424 GLTKWVEIGNSGMFRPEMLLPMGLPADVNVAGYGLSLERPTMIKYGINNIRDLFGSKIDL 483
Query: 86 RMVYNNPICRLDK 48
+VYNNPICRLDK
Sbjct: 484 NVVYNNPICRLDK 496
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -2
Query: 810 GFPXXPTXKYVXVHFX-IXRIVQPXQHPXRDAHDTFXMSSPAATTEFP 670
GF T +YV F + QP QHP RDAHDTF +S PA +T+FP
Sbjct: 242 GFSEMATNRYVESSFWNFDALFQPQQHPARDAHDTFFVSDPAISTKFP 289
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1
Query: 673 PHXYLERVKKVHSKG 629
P YLERVK VHSKG
Sbjct: 289 PEDYLERVKTVHSKG 303
>AF000263-5|AAG00015.1| 552|Caenorhabditis elegans Phenylalanyl (f)
trna synthetaseprotein 1, isoform a protein.
Length = 552
Score = 325 bits (798), Expect = 3e-89
Identities = 149/193 (77%), Positives = 165/193 (85%)
Frame = -3
Query: 626 YGSQGYRYDWKIGEAQKNLLRTHTTAVSARMLYRLAQQTEFTPQKYFSIDKVFRNETLDA 447
YGS GY YDWKI EAQKN+LRTHTTAVSAR LY+LAQ+ F P K FSID+VFRNETLDA
Sbjct: 361 YGSAGYNYDWKIEEAQKNVLRTHTTAVSARQLYQLAQEG-FRPSKLFSIDRVFRNETLDA 419
Query: 446 THLAEFHQVEGVVADRGLGLADLITVLDAFFKRLGFDQLQFKPAYNPYTEPSMEIFAYHT 267
THLAEFHQVEGV+A++ L LA LI + FFK+LG L+FKP YNPYTEPSMEIFAYH
Sbjct: 420 THLAEFHQVEGVIAEKNLSLAHLIGIFTEFFKKLGITNLRFKPTYNPYTEPSMEIFAYHQ 479
Query: 266 GLAKWIEIGNSGVFRPEMLLPMGLPEDVNVIAWGLSLERPTMIKYGLNNIRDLVGPKVDL 87
GL KW+EIGNSG+FRPEMLLPMGLP DVNV +GLSLERPTMIKYG+NNIRDL G K+DL
Sbjct: 480 GLTKWVEIGNSGMFRPEMLLPMGLPADVNVAGYGLSLERPTMIKYGINNIRDLFGSKIDL 539
Query: 86 RMVYNNPICRLDK 48
+VYNNPICRLDK
Sbjct: 540 NVVYNNPICRLDK 552
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -2
Query: 810 GFPXXPTXKYVXVHFX-IXRIVQPXQHPXRDAHDTFXMSSPAATTEFP 670
GF T +YV F + QP QHP RDAHDTF +S PA +T+FP
Sbjct: 298 GFSEMATNRYVESSFWNFDALFQPQQHPARDAHDTFFVSDPAISTKFP 345
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1
Query: 673 PHXYLERVKKVHSKG 629
P YLERVK VHSKG
Sbjct: 345 PEDYLERVKTVHSKG 359
>AL132943-13|CAC14396.3| 458|Caenorhabditis elegans Hypothetical
protein Y60A3A.13 protein.
Length = 458
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/68 (33%), Positives = 41/68 (60%)
Frame = -3
Query: 317 AYNPYTEPSMEIFAYHTGLAKWIEIGNSGVFRPEMLLPMGLPEDVNVIAWGLSLERPTMI 138
AY P+T PS E+ ++ G +W+E+ G+ ++L G+ + + A+G+ LER M+
Sbjct: 271 AYFPFTHPSWELEVFYNG--QWLEVLGCGIMEQKLLESAGVTDKIGW-AFGIGLERIAMV 327
Query: 137 KYGLNNIR 114
YG+ +IR
Sbjct: 328 LYGIPDIR 335
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 491 YFSIDKVFRNETLDATHLAEFHQVEGV 411
+ I V+R + +D TH FHQ+EGV
Sbjct: 170 FLVIGDVYRRDEVDRTHYPCFHQIEGV 196
>AL117207-24|CAB60398.3| 458|Caenorhabditis elegans Hypothetical
protein Y60A3A.13 protein.
Length = 458
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/68 (33%), Positives = 41/68 (60%)
Frame = -3
Query: 317 AYNPYTEPSMEIFAYHTGLAKWIEIGNSGVFRPEMLLPMGLPEDVNVIAWGLSLERPTMI 138
AY P+T PS E+ ++ G +W+E+ G+ ++L G+ + + A+G+ LER M+
Sbjct: 271 AYFPFTHPSWELEVFYNG--QWLEVLGCGIMEQKLLESAGVTDKIGW-AFGIGLERIAMV 327
Query: 137 KYGLNNIR 114
YG+ +IR
Sbjct: 328 LYGIPDIR 335
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 491 YFSIDKVFRNETLDATHLAEFHQVEGV 411
+ I V+R + +D TH FHQ+EGV
Sbjct: 170 FLVIGDVYRRDEVDRTHYPCFHQIEGV 196
>AB096637-1|BAC76737.1| 458|Caenorhabditis elegans mitochondrial
phenylalanyl-tRNAsynthetase protein.
Length = 458
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/68 (33%), Positives = 41/68 (60%)
Frame = -3
Query: 317 AYNPYTEPSMEIFAYHTGLAKWIEIGNSGVFRPEMLLPMGLPEDVNVIAWGLSLERPTMI 138
AY P+T PS E+ ++ G +W+E+ G+ ++L G+ + + A+G+ LER M+
Sbjct: 271 AYFPFTHPSWELEVFYNG--QWLEVLGCGIMEQKLLESAGVTDKIGW-AFGIGLERIAMV 327
Query: 137 KYGLNNIR 114
YG+ +IR
Sbjct: 328 LYGIPDIR 335
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 491 YFSIDKVFRNETLDATHLAEFHQVEGV 411
+ I V+R + +D TH FHQ+EGV
Sbjct: 170 FLVIGDVYRRDEVDRTHYPCFHQIEGV 196
>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical
protein T20G5.1 protein.
Length = 1681
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -3
Query: 521 AQQTEFTPQKYFSIDKVFRNETLDATHLAEFHQVEGVVADRGLGLADLITVLDAFFK 351
A++ F P F + ++ RN D H A+F Q+ ++ G LADL ++D F +
Sbjct: 503 AKRVGFQPDYLFQLRQILRNSNPD--HGAKFAQLLVSESENGEPLADLSQIIDCFME 557
>Z11795-1|CAA77838.1| 130|Caenorhabditis elegans pceh16-1 protein
protein.
Length = 130
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = -3
Query: 626 YGSQGYRYDWKIGEAQKNLL-RTHTTAVSARMLYRLAQQTEFTPQKYFSIDK-VFRNETL 453
Y ++D+K ++K++ R A SAR L RL +TEF KY S++K + ++TL
Sbjct: 7 YNMYSRKHDYK--RSRKSVCERKPRQAYSARQLDRL--ETEFQTDKYLSVNKRIQLSQTL 62
Query: 452 DAT 444
+ T
Sbjct: 63 NLT 65
>U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform b protein.
Length = 199
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = -3
Query: 623 GSQGYRYDWKIGEAQKNLL-RTHTTAVSARMLYRLAQQTEFTPQKYFSIDK-VFRNETLD 450
G ++D+K ++K++ R A SAR L RL +TEF KY S++K + ++TL+
Sbjct: 77 GVSARKHDYK--RSRKSVCERKPRQAYSARQLDRL--ETEFQTDKYLSVNKRIQLSQTLN 132
Query: 449 AT 444
T
Sbjct: 133 LT 134
>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical
protein F36H1.2b protein.
Length = 1379
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 622 PYHLYCAPSSPSPGXHGELR 681
P L+C P PG HG LR
Sbjct: 625 PVRLFCCMKPPYPGIHGSLR 644
>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical
protein F36H1.2a protein.
Length = 1398
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 622 PYHLYCAPSSPSPGXHGELR 681
P L+C P PG HG LR
Sbjct: 625 PVRLFCCMKPPYPGIHGSLR 644
>Z11794-1|CAA77837.1| 66|Caenorhabditis elegans ceh16-1 protein
protein.
Length = 66
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = -3
Query: 608 RYDWKIGEAQKNLL-RTHTTAVSARMLYRLAQQTEFTPQKYFSIDK-VFRNETLDAT 444
++D+K ++K++ R A SAR L RL +TEF KY S++K + ++TL+ T
Sbjct: 2 KHDYK--RSRKSVCERKPRQAYSARQLDRL--ETEFQTDKYLSVNKRIQLSQTLNLT 54
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 162 QAPRYHVHVLRQAHGQQHLRSEHPRITNLYPFGETGVVCEY 284
Q P+ V R A G ++ +PR+ + YPF VV Y
Sbjct: 31 QVPQQQVQQFRPA-GNVYIAQPNPRVVSQYPFRSAPVVRPY 70
>U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform c protein.
Length = 514
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = -3
Query: 494 KYFSIDKVFRNETLDATHLAEFHQVEGVVA----DRGLGLA-DLITVLDAFFKRLGFDQL 330
+ + + ++FRNE +D TH EF E +A + + L DL++ + K G ++
Sbjct: 235 RVYEVGRLFRNEGIDLTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVMSIK--GTYKI 292
Query: 329 QFKPAYNPYTEPSMEI 282
++ P P TEP E+
Sbjct: 293 EYHP-NGPNTEPVYEV 307
>U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform b protein.
Length = 596
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = -3
Query: 494 KYFSIDKVFRNETLDATHLAEFHQVEGVVA----DRGLGLA-DLITVLDAFFKRLGFDQL 330
+ + + ++FRNE +D TH EF E +A + + L DL++ + K G ++
Sbjct: 317 RVYEVGRLFRNEGIDLTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVMSIK--GTYKI 374
Query: 329 QFKPAYNPYTEPSMEI 282
++ P P TEP E+
Sbjct: 375 EYHP-NGPNTEPVYEV 389
>U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform a protein.
Length = 572
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = -3
Query: 494 KYFSIDKVFRNETLDATHLAEFHQVEGVVA----DRGLGLA-DLITVLDAFFKRLGFDQL 330
+ + + ++FRNE +D TH EF E +A + + L DL++ + K G ++
Sbjct: 293 RVYEVGRLFRNEGIDLTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVMSIK--GTYKI 350
Query: 329 QFKPAYNPYTEPSMEI 282
++ P P TEP E+
Sbjct: 351 EYHP-NGPNTEPVYEV 365
>U40933-7|AAA81676.4| 122|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform a protein.
Length = 122
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = -3
Query: 608 RYDWKIGEAQKNLL-RTHTTAVSARMLYRLAQQTEFTPQKYFSIDK-VFRNETLDAT 444
++D+K ++K++ R A SAR L RL +TEF KY S++K + ++TL+ T
Sbjct: 5 KHDYK--RSRKSVCERKPRQAYSARQLDRL--ETEFQTDKYLSVNKRIQLSQTLNLT 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,753,746
Number of Sequences: 27780
Number of extensions: 355727
Number of successful extensions: 1126
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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