Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H05
(836 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein. 35 0.42
BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2... 35 0.42
AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2... 35 0.42
AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2... 35 0.42
AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2... 35 0.42
AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2... 35 0.42
AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein. 35 0.42
AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein. 35 0.42
AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein pro... 35 0.42
AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein. 35 0.42
AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein pro... 35 0.42
AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa varia... 31 6.8
AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa varia... 31 6.8
AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens ... 31 6.8
AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein... 31 6.8
BC141863-1|AAI41864.1| 407|Homo sapiens TPRX1 protein protein. 30 9.0
AK097640-1|BAC05130.1| 411|Homo sapiens protein ( Homo sapiens ... 30 9.0
>Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.
Length = 1379
Score = 34.7 bits (76), Expect = 0.42
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIP-YPVXKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 442
P VP P P + PV VP PV +PV P P+ + +P IE+
Sbjct: 888 PIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 938
>BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1377
Score = 34.7 bits (76), Expect = 0.42
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIP-YPVXKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 442
P VP P P + PV VP PV +PV P P+ + +P IE+
Sbjct: 886 PIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 34.7 bits (76), Expect = 0.42
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIP-YPVXKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 442
P VP P P + PV VP PV +PV P P+ + +P IE+
Sbjct: 264 PIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 34.7 bits (76), Expect = 0.42
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIP-YPVXKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 442
P VP P P + PV VP PV +PV P P+ + +P IE+
Sbjct: 884 PIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 34.7 bits (76), Expect = 0.42
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIP-YPVXKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 442
P VP P P + PV VP PV +PV P P+ + +P IE+
Sbjct: 264 PIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 34.7 bits (76), Expect = 0.42
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIP-YPVXKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 442
P VP P P + PV VP PV +PV P P+ + +P IE+
Sbjct: 884 PIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 34.7 bits (76), Expect = 0.42
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIP-YPVXKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 442
P VP P P + PV VP PV +PV P P+ + +P IE+
Sbjct: 886 PIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 34.7 bits (76), Expect = 0.42
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIP-YPVXKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 442
P VP P P + PV VP PV +PV P P+ + +P IE+
Sbjct: 886 PIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein
protein.
Length = 1113
Score = 34.7 bits (76), Expect = 0.42
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIP-YPVXKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 442
P VP P P + PV VP PV +PV P P+ + +P IE+
Sbjct: 622 PIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 672
>AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein.
Length = 699
Score = 34.7 bits (76), Expect = 0.42
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIP-YPVXKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 442
P VP P P + PV VP PV +PV P P+ + +P IE+
Sbjct: 614 PIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 664
>AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein
protein.
Length = 757
Score = 34.7 bits (76), Expect = 0.42
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIP-YPVXKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 442
P VP P P + PV VP PV +PV P P+ + +P IE+
Sbjct: 266 PIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 316
>AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 507
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 467 FSMWTGYGLSTGMLTGNGTAXSTGYG 544
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 508
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 467 FSMWTGYGLSTGMLTGNGTAXSTGYG 544
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ10655 fis, clone NT2RP2005933, weakly similar to
NUCLEOPORIN NUP57. ).
Length = 484
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 467 FSMWTGYGLSTGMLTGNGTAXSTGYG 544
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein
protein.
Length = 505
Score = 30.7 bits (66), Expect = 6.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 467 FSMWTGYGLSTGMLTGNGTAXSTGYG 544
F TG+G +TG TG GT TG G
Sbjct: 60 FGFGTGFGTTTGTSTGLGTGLGTGLG 85
>BC141863-1|AAI41864.1| 407|Homo sapiens TPRX1 protein protein.
Length = 407
Score = 30.3 bits (65), Expect = 9.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIPYPVXKAVPFPVNIPVDRPYPV 478
P P AP P IP P+ ++P P+ P P P+
Sbjct: 94 PGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPI 131
>AK097640-1|BAC05130.1| 411|Homo sapiens protein ( Homo sapiens
cDNA FLJ40321 fis, clone TESTI2030860. ).
Length = 411
Score = 30.3 bits (65), Expect = 9.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 591 PXXVPXXAPYPXEKHIPYPVXKAVPFPVNIPVDRPYPV 478
P P AP P IP P+ ++P P+ P P P+
Sbjct: 94 PGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPI 131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,326,055
Number of Sequences: 237096
Number of extensions: 786060
Number of successful extensions: 2149
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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