Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H04
(852 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 65 8e-11
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 65 8e-11
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 65 8e-11
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 61 1e-09
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 61 1e-09
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 33 4e-04
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 39 0.006
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 33 0.39
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 33 0.39
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 33 0.39
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 33 0.39
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 33 0.39
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 33 0.39
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 33 0.39
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 33 0.39
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 33 0.39
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 29 3.6
SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07) 28 8.4
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 64.9 bits (151), Expect = 8e-11
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQY 595
+ F YTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 64.9 bits (151), Expect = 8e-11
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQY 595
+ F YTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 337 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 370
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 64.9 bits (151), Expect = 8e-11
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQY 595
+ F YTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 61.3 bits (142), Expect = 1e-09
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQY 595
+ F YTGEGMDEMEFTEAESNM+DL++EYQQY
Sbjct: 157 KAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQY 190
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 61.3 bits (142), Expect = 1e-09
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQY 595
+ F YTGEGMDEMEFTEAESNM+DL++EYQQY
Sbjct: 219 KAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQY 252
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 32.7 bits (71), Expect(2) = 4e-04
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -1
Query: 648 FTEAESNMNDLVSEYQQY 595
+ A+SN+NDL+SEYQQY
Sbjct: 256 YFSADSNLNDLISEYQQY 273
Score = 29.1 bits (62), Expect(2) = 4e-04
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESN 628
+ F YT EGMD +EFTE + N
Sbjct: 211 RAFLHWYTTEGMDPLEFTEIKRN 233
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F YT EGMD +F EA++++ DL+S YQQ
Sbjct: 297 RAFLHWYTEEGMDSQQFEEADNDILDLISTYQQ 329
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 16 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 200 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 386 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 100 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 132
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 554 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 586
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 339 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 371
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 773 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 1182 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1214
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 387 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 818 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 850
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 367 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 399
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 835 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 867
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 987 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1019
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 327 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 359
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 200 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 315 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 347
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 696 QGFXAXYTGEGMDEMEFTEAESNMNDLVSEYQQ 598
+ F Y GEGM+E EF+EA ++ L +Y++
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -1
Query: 849 PXXXGMXPQXXKPPGXTXPXGF-QXGRPXIGNPPP 748
P M P PPG P GF G P +G PP
Sbjct: 242 PPPHSMPPPGMPPPGMMPPPGFPPMGMPGMGGMPP 276
>SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07)
Length = 502
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 176 NQVQPYKKKDLFPLCDSVTAPRACSAEGLASLRVAVYCNKHSRAALR 316
+++Q L LC SV+ C+ A L ++C + S A LR
Sbjct: 136 SRLQQLASLSLTDLCQSVSGDEGCAVAETAELIALMHCLESSAATLR 182
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,112,269
Number of Sequences: 59808
Number of extensions: 354360
Number of successful extensions: 866
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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